PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy018563 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | TCP | ||||||||
Protein Properties | Length: 221aa MW: 23479 Da PI: 9.1202 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.4 | 2.5e-38 | 24 | 128 | 3 | 109 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..............sec.eaesssssasnsss 87 +++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+qa+pai+e+tgt++++a s + +++++ s Ahy018563 24 VARRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAiavsvggtlkipttSTAtPQGEEEAS------ 117 67899**********************************************************8888833322222222211111111111111...... PP TCP 88 g....kaaksaakskksqksaasaln 109 + +a++ ++ Ahy018563 118 RkrrrRASN---------------SE 128 011111111...............22 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51369 | 27.938 | 29 | 83 | IPR017887 | Transcription factor TCP subgroup |
Pfam | PF03634 | 1.9E-31 | 29 | 123 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
KEELADSEKS LEERLQVAIV PTPVARRPSK DRHTKVEGRG RRIRMPATCA ARIFQLTREL 60 GHKSDGETIR WLLEQAEPAI IEATGTGTIP AIAVSVGGTL KIPTTSTATP QGEEEASRKR 120 RRRASNSEFI DVNEEQQSSV SSGLAPITQT AYGASSSGGG LVPMWTIGGG GGGSNGPFFM 180 FPNAAATSSG DGVANHPHYW AFPANAAPYF NVQARPISGF X |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 121 | RKRRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025620185.1 | 1e-160 | transcription factor TCP19 isoform X2 | ||||
Refseq | XP_025620186.1 | 1e-160 | transcription factor TCP19 isoform X2 | ||||
Swissprot | Q9LT89 | 2e-66 | TCP19_ARATH; Transcription factor TCP19 | ||||
TrEMBL | A0A445F5H9 | 1e-102 | A0A445F5H9_GLYSO; Transcription factor TCP19 | ||||
STRING | GLYMA20G29330.3 | 1e-103 | (Glycine max) |