PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018107
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 341aa    MW: 39426.8 Da    PI: 9.1948
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58462380PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67e-1615104298
                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                fk+ ++ +    g+l +p+kf++++gg  +++  + l+ ++g +W+v+   ++++g ++++kGWkeF+    L+ g  + F+++g+s+f   v++f+
  Ahy018107  15 FKIILRQSPQD-GNLKIPNKFTSKYGGGVKNP--VYLKPPDGTQWKVQW--TQHDGDILFEKGWKEFAAYYSLDHGHLLRFEFNGTSCF--EVHIFD 104
                55554444444.55***********5554455..***************..**************************************..888886 PP
2B335.32e-112643342194
                HH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
         B3  21 kfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                +f  ++ ++ke++++++    +g+ W  kl       + ++++GW+ F  +n+Lk+gD++vF+l++ ++  l  
  Ahy018107 264 SFYIKYFENKEQNVEIR---YQGKLWPAKLLCYPAAAAAYISNGWRPFSLENDLKVGDVCVFELINGENPVLDA 334
                56667777778887777...799*******889999999************************99755554555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100172.87E-1313104No hitNo description
PROSITE profilePS5086312.06913106IPR003340B3 DNA binding domain
SuperFamilySSF1019363.73E-2013106IPR015300DNA-binding pseudobarrel domain
SMARTSM010195.2E-1314106IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.3E-2014106IPR015300DNA-binding pseudobarrel domain
PfamPF023624.9E-1322104IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.1E-15206228IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.24E-13246340IPR015300DNA-binding pseudobarrel domain
CDDcd100171.73E-11246338No hitNo description
SMARTSM010194.6E-4247340IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.1E-15260340IPR015300DNA-binding pseudobarrel domain
PfamPF023622.6E-9264338IPR003340B3 DNA binding domain
PROSITE profilePS5086310.828282340IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
NQTKHSPPKT LIRFFKIILR QSPQDGNLKI PNKFTSKYGG GVKNPVYLKP PDGTQWKVQW  60
TQHDGDILFE KGWKEFAAYY SLDHGHLLRF EFNGTSCFEV HIFDMSGLEI HYPFNNRIDN  120
DSVETLNELP PQCWGREQKR LKTPLSLSLP FTSKQLRIAT ETRDVEGGSQ SEEKNIEMPI  180
IPSVIHRSDV FEPGTCGFRC LEEAQKFNSE NPSFMIKLGK SNLQRSRAXK FKLIHLSIRK  240
LKYHASFYVV LLHNVIYHQN FKASFYIKYF ENKEQNVEIR YQGKLWPAKL LCYPAAAAAY  300
ISNGWRPFSL ENDLKVGDVC VFELINGENP VLDAHIYRAN G
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020968826.10.0B3 domain-containing transcription factor VRN1-like isoform X1
RefseqXP_025680883.10.0B3 domain-containing transcription factor VRN1
TrEMBLA0A444XAS30.0A0A444XAS3_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-28B3 family protein