PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy017731

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 785aa MW: 86956 Da PI: 6.5744

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59539460	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.9	9.6e-29	399	449	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ Ahy017731 399 EKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 449 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.621	388	469	IPR003035	RWP-RK domain
Pfam	PF02042	1.3E-25	402	449	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.41E-23	688	776	No hit	No description
Pfam	PF00564	1.0E-18	691	772	IPR000270	PB1 domain
SMART	SM00666	2.5E-26	691	773	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	2.0E-27	691	772	No hit	No description
PROSITE profile	PS51745	25.983	691	773	IPR000270	PB1 domain
CDD	cd06407	7.58E-38	692	772	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 785 aa Download sequence Send to blast
FVLDPHSNGL HQYRTVSLMY VFSADGEKEE SLGLPGRVYQ QKVPEWTPDV QYYSTKEYPR 60 RDHAQHYNVR GTLALPVFEP SMQSCVGVLE LIMTSQKINY APEVDKICRA LEAVNLKSSE 120 ILGHQYTQIC NEGRQNALAE ILEILTVVCE THNLPLAQTW VPCRHRSVLA HGGGLKKSCS 180 SFDGSCMGKV CMSTTDIAFY IIDAHLWGFR EACVEHHLQQ GQGVAGRAFS SHSMSFCRNI 240 TRFCKIDYPL VHYALMFGLT SSFSICLRSS HTGDDDYVLE FFLPPRITDF NEQKALLGSI 300 LTIMKQHFQS LKIASGVELE QNALVETIEA TIEGVHLRFE SIPVRQDASP NVREELAQDP 360 PLQKIMMGCN DGGSIGDQIP SLETKNTNKP SERKRGKTEK SISLEVLQRY FAGSLKDAAK 420 SLGVCPTTMK RICRQHGISR WPSRKINKVN RSLSKLKRVI ESVQGAEGAF ALNPLSTSPL 480 PFPEHSTPNK FSQQASPTEP QIRENELDAS KVLETTRIAR AQCLEKMVND KSGSIREVGK 540 ETKGPRAKSC SSADSTNPTS HGSCHGSPPI ESSPVKDIFI TSNNDQCVGL RSPEATMQPP 600 NNTLSYPTTC TMPDMVATEL QEPFGGMLVE DAGSSKDLRN LCPSVAEAIV EDMAPEPCRT 660 NPPFSGLAPK QCMDPLKETV TPFAARIEMK TVTIKATYRE DIIRFRVSLN CGIVELKEEV 720 AKRLKLEVGT FDIKYLDDDH EWVLIACDAD LQECIDVSRS SASNIIRVLV HEITSNLGSS 780 CESSG

Sequence ? help Back to Top

Protein Sequence Length: 785 aa Download sequence Send to blast

FVLDPHSNGL HQYRTVSLMY VFSADGEKEE SLGLPGRVYQ QKVPEWTPDV QYYSTKEYPR  60
RDHAQHYNVR GTLALPVFEP SMQSCVGVLE LIMTSQKINY APEVDKICRA LEAVNLKSSE  120
ILGHQYTQIC NEGRQNALAE ILEILTVVCE THNLPLAQTW VPCRHRSVLA HGGGLKKSCS  180
SFDGSCMGKV CMSTTDIAFY IIDAHLWGFR EACVEHHLQQ GQGVAGRAFS SHSMSFCRNI  240
TRFCKIDYPL VHYALMFGLT SSFSICLRSS HTGDDDYVLE FFLPPRITDF NEQKALLGSI  300
LTIMKQHFQS LKIASGVELE QNALVETIEA TIEGVHLRFE SIPVRQDASP NVREELAQDP  360
PLQKIMMGCN DGGSIGDQIP SLETKNTNKP SERKRGKTEK SISLEVLQRY FAGSLKDAAK  420
SLGVCPTTMK RICRQHGISR WPSRKINKVN RSLSKLKRVI ESVQGAEGAF ALNPLSTSPL  480
PFPEHSTPNK FSQQASPTEP QIRENELDAS KVLETTRIAR AQCLEKMVND KSGSIREVGK  540
ETKGPRAKSC SSADSTNPTS HGSCHGSPPI ESSPVKDIFI TSNNDQCVGL RSPEATMQPP  600
NNTLSYPTTC TMPDMVATEL QEPFGGMLVE DAGSSKDLRN LCPSVAEAIV EDMAPEPCRT  660
NPPFSGLAPK QCMDPLKETV TPFAARIEMK TVTIKATYRE DIIRFRVSLN CGIVELKEEV  720
AKRLKLEVGT FDIKYLDDDH EWVLIACDAD LQECIDVSRS SASNIIRVLV HEITSNLGSS  780
CESSG

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal. {ECO:0000269\|PubMed:18826430}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Not regulated by the N source or by nitrate. {ECO:0000269\|PubMed:18826430}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020986807.1	0.0	protein NLP7 isoform X2
Swissprot	Q84TH9	0.0	NLP7_ARATH; Protein NLP7
TrEMBL	A0A445BG54	0.0	A0A445BG54_ARAHY; Uncharacterized protein
STRING	GLYMA10G37860.2	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	NIN like protein 7

Publications ? help Back to Top
Xu N, et al. The Arabidopsis NRG2 Protein Mediates Nitrate Signaling and Interacts with and Regulates Key Nitrate Regulators. Plant Cell, 2016. 28(2): p. 485-504 [PMID:26744214] Karve R,Suárez-Román F,Iyer-Pascuzzi AS The Transcription Factor NIN-LIKE PROTEIN7 Controls Border-Like Cell Release. Plant Physiol., 2016. 171(3): p. 2101-11 [PMID:27221617] Yu LH, et al. Overexpression of Arabidopsis NLP7 improves plant growth under both nitrogen-limiting and -sufficient conditions by enhancing nitrogen and carbon assimilation. Sci Rep, 2016. 6: p. 27795 [PMID:27293103] Menz J,Li Z,Schulze WX,Ludewig U Early nitrogen-deprivation responses in Arabidopsis roots reveal distinct differences on transcriptome and (phospho-) proteome levels between nitrate and ammonium nutrition. Plant J., 2016. 88(5): p. 717-734 [PMID:27419465] Yan D, et al. NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis. Nat Commun, 2016. 7: p. 13179 [PMID:27731416] Guan P, et al. Interacting TCP and NLP transcription factors control plant responses to nitrate availability. Proc. Natl. Acad. Sci. U.S.A., 2017. 114(9): p. 2419-2424 [PMID:28202720] Liu KH, et al. Discovery of nitrate-CPK-NLP signalling in central nutrient-growth networks. Nature, 2017. 545(7654): p. 311-316 [PMID:28489820] Li Z, et al. The Arabidopsis CPSF30-L gene plays an essential role in nitrate signaling and regulates the nitrate transceptor gene NRT1.1. New Phytol., 2017. 216(4): p. 1205-1222 [PMID:28850721] Cao H, et al. Overexpression of the Maize ZmNLP6 and ZmNLP8 Can Complement the Arabidopsis Nitrate Regulatory Mutant nlp7 by Restoring Nitrate Signaling and Assimilation. Front Plant Sci, 2017. 8: p. 1703 [PMID:29051766] Konishi N,Okubo T,Yamaya T,Hayakawa T,Minamisawa K Nitrate Supply-Dependent Shifts in Communities of Root-Associated Bacteria in Arabidopsis. Microbes Environ., 2017. 32(4): p. 314-323 [PMID:29187692] Karve RA,Iyer-Pascuzzi AS Further insights into the role of NIN-LIKE PROTEIN 7 (NLP7) in root cap cell release. Plant Signal Behav, 2018. 13(1): p. e1414122 [PMID:29215953] Zhao L, et al. The Arabidopsis NLP7 gene regulates nitrate signaling via NRT1.1-dependent pathway in the presence of ammonium. Sci Rep, 2018. 8(1): p. 1487 [PMID:29367694]