PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy017639 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 203aa MW: 22962.8 Da PI: 8.8256 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 23.3 | 1.6e-07 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H Ahy017639 47 HYCSVCGKGFKRDANLRMHMRAH 69 68*******************99 PP | |||||||
2 | zf-C2H2 | 12 | 0.00065 | 137 | 160 | 1 | 23 |
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + Ahy017639 137 YVCKRCNqKQFSVLSDLRTHEKHC 160 9*******************9876 PP | |||||||
3 | zf-C2H2 | 11 | 0.0013 | 169 | 183 | 6 | 20 |
TTEEESSHHHHHHHH CS zf-C2H2 6 CgksFsrksnLkrHi 20 Cg++Fsrk+ L+ H Ahy017639 169 CGTTFSRKDKLMGHV 183 ************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.54E-6 | 45 | 72 | No hit | No description |
Gene3D | G3DSA:3.30.160.60 | 7.6E-8 | 47 | 103 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 12.736 | 47 | 74 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.0022 | 47 | 69 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 49 | 69 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 160 | 99 | 132 | IPR015880 | Zinc finger, C2H2-like |
SMART | SM00355 | 23 | 137 | 159 | IPR015880 | Zinc finger, C2H2-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
XTGVDCKVNN NNDDDDPSVE ISDTKEGAKK LDIIELDAAD LLAKYTHYCS VCGKGFKRDA 60 NLRMHMRAHG DEYKTSAALS NPLKQNNNGE NGDCLPKKYS CPQEGCRWNQ KHAKFQPLKS 120 MICAKNHYKR SHCPKMYVCK RCNQKQFSVL SDLRTHEKHC GDLKWQCSCG TTFSRKDKLM 180 GHVALFVGHR ALSIAFHQYN SAA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025614143.1 | 1e-149 | protein SENSITIVE TO PROTON RHIZOTOXICITY 2 | ||||
Swissprot | Q0WT24 | 8e-91 | STOP2_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 2 | ||||
TrEMBL | A0A445BW57 | 1e-145 | A0A445BW57_ARAHY; Uncharacterized protein | ||||
STRING | XP_004294539.1 | 1e-105 | (Fragaria vesca) |