PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy017430 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25915.8 Da PI: 6.1021 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.5e-17 | 102 | 151 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s+y+GV ++k +g++vAeIrdp +r r++lg+f t+eeAa a+++ r ++ Ahy017430 102 SKYRGVQRRK-WGKYVAEIRDP----IRgVRVWLGTFNTEEEAAIAYEKKRIEFV 151 89****8887.**********7....246*********************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 3.47E-17 | 102 | 152 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 9.2E-11 | 102 | 151 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.34E-21 | 103 | 150 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.2E-21 | 103 | 150 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.031 | 103 | 167 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.9E-18 | 103 | 157 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-9 | 104 | 115 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-9 | 126 | 142 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
XLEGMKCKRG TEGNLNIMRR IRIIYSDPYA TDCSSEEDDN FLSNHYEQHG PKRFIREILV 60 PCMPTESYEV DDDDSLQQGI SIDKIKPCLN LLRNHRSRRS SSKYRGVQRR KWGKYVAEIR 120 DPIRGVRVWL GTFNTEEEAA IAYEKKRIEF VNSLLALRRM VGVLDLEDGN QVLSHPSPAS 180 VLDVAATRAS SDNDSNGPVV EGKDNVETSA IEGVMEPVHA EDHHSFQH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 5e-12 | 102 | 145 | 13 | 57 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_029154288.1 | 1e-168 | ethylene-responsive transcription factor ERF119 | ||||
TrEMBL | A0A445D2D0 | 1e-165 | A0A445D2D0_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA07G10116.1 | 5e-68 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 2e-23 | ERF family protein |