PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy017120

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GRAS

Protein Properties

Length: 814aa MW: 91453.5 Da PI: 6.6409

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58471180	PU_unref	Unigene	View CDS
gnl\|UG\|Ahy#S59524560	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-230891	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	380.9	1.5e-116	437	813	1	373
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 l++lL+ cA+avs++d++ a++lL+++++++ p gd+ qRla yf+ +L+ar+a++++++ ++ + ++ + ++ l+a+++f ++P+ kf+h+ N+ Ahy017120 437 LRTLLVLCAQAVSANDQRTANELLKQIRQHSLPFGDAYQRLARYFADGLEARMAGTGPGIHIFYASLSYKKFSAADFLKAYQVFISACPFKKFAHFFSNK 536 5789**************************************************99998777777777777*********************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 +Il+ +e++e++Hi+Df+i +G+QWp L++ +a+R++gpp+lRiTg++ p++g +e++eetg+rLak++++++vpfe+++++++++e++++e+L++k Ahy017120 537 MILNIAEKAETLHIVDFGILYGFQWPILIKFIAKRDGGPPKLRITGIEYPQAGfrPTERIEETGRRLAKYCKRFNVPFEYKAIASRHWETIQIEDLNIKD 636 ************************************************9*************************9999********** PP GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298 +E++aVn+ ++ ++ll+e+v+++s+r++vL+l+++++P ++ + + ++n++ Fl+rf eal +ysa++d++++ +pr++++r+++Ere+lgrei+nvv Ahy017120 637 NEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIRRINPAIFAQTVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNSWRSMLEREFLGREIMNVV 736 ************************************************************************************************ PP GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaW 373 aceg er+er et+++W++r ++aGF+++pl++ +++ ++ l++ + + + +e+++++++gWk+r L++ S+W Ahy017120 737 ACEGLERVERPETYKQWQARNSRAGFRQLPLDKALMSKFRSKLKEWYqhHKDFVFDEDNNWMLQGWKGRILYASSCW 813 ***************************************998756677*********************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	66.991	411	792	IPR005202	Transcription factor GRAS
Pfam	PF03514	5.3E-114	437	813	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence Send to blast
XYINAYGFGD YGGALLSDFN DWDLHRQYNH PFDLTPSNAF DRFDADTFGL HAHAVSNSGS 60 SEPFVPPSSA SRVEKSMPGS AFGAVASMPD PSVEDTDFSE TVRYISQILL EENFEDKPCM 120 CYNPLSLQDT EKSFYDALNQ EFPLSPNEHP LDIHQNLESP DGVSAGSFPT GSSGGCSNSN 180 SSSTSTSSSE NHLSSHDFKT LSPDTPVSGD SSLQFDSHSH LISHVPSQLH LPQHALTSIG 240 DGVFDLDPSA TKLLAQNIFS NADSILQFKR GLEEASKFLP PGPRLSIGLE SSSMHAEESK 300 RRVEKAAVPV MVENDAKERS NRVVAGPYHI VPATTKAAKN TAARSLDGVK SRKHHARQGD 360 DGEEERCNKQ SAVSVEEESE ISEMFDKVLL SVENVPLSAE QQGGLVVDTQ LIEQPHSSEG 420 GRSRSKKKGR KKETVDLRTL LVLCAQAVSA NDQRTANELL KQIRQHSLPF GDAYQRLARY 480 FADGLEARMA GTGPGIHIFY ASLSYKKFSA ADFLKAYQVF ISACPFKKFA HFFSNKMILN 540 IAEKAETLHI VDFGILYGFQ WPILIKFIAK RDGGPPKLRI TGIEYPQAGF RPTERIEETG 600 RRLAKYCKRF NVPFEYKAIA SRHWETIQIE DLNIKDNEVV AVNCLVRFKN LLEETVEVNS 660 PRNAVLNLIR RINPAIFAQT VVNGSYNAPF FLTRFREALF HYSAIYDMFD TLIPRNNSWR 720 SMLEREFLGR EIMNVVACEG LERVERPETY KQWQARNSRA GFRQLPLDKA LMSKFRSKLK 780 EWYQHHKDFV FDEDNNWMLQ GWKGRILYAS SCWV

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence Send to blast

XYINAYGFGD YGGALLSDFN DWDLHRQYNH PFDLTPSNAF DRFDADTFGL HAHAVSNSGS  60
SEPFVPPSSA SRVEKSMPGS AFGAVASMPD PSVEDTDFSE TVRYISQILL EENFEDKPCM  120
CYNPLSLQDT EKSFYDALNQ EFPLSPNEHP LDIHQNLESP DGVSAGSFPT GSSGGCSNSN  180
SSSTSTSSSE NHLSSHDFKT LSPDTPVSGD SSLQFDSHSH LISHVPSQLH LPQHALTSIG  240
DGVFDLDPSA TKLLAQNIFS NADSILQFKR GLEEASKFLP PGPRLSIGLE SSSMHAEESK  300
RRVEKAAVPV MVENDAKERS NRVVAGPYHI VPATTKAAKN TAARSLDGVK SRKHHARQGD  360
DGEEERCNKQ SAVSVEEESE ISEMFDKVLL SVENVPLSAE QQGGLVVDTQ LIEQPHSSEG  420
GRSRSKKKGR KKETVDLRTL LVLCAQAVSA NDQRTANELL KQIRQHSLPF GDAYQRLARY  480
FADGLEARMA GTGPGIHIFY ASLSYKKFSA ADFLKAYQVF ISACPFKKFA HFFSNKMILN  540
IAEKAETLHI VDFGILYGFQ WPILIKFIAK RDGGPPKLRI TGIEYPQAGF RPTERIEETG  600
RRLAKYCKRF NVPFEYKAIA SRHWETIQIE DLNIKDNEVV AVNCLVRFKN LLEETVEVNS  660
PRNAVLNLIR RINPAIFAQT VVNGSYNAPF FLTRFREALF HYSAIYDMFD TLIPRNNSWR  720
SMLEREFLGR EIMNVVACEG LERVERPETY KQWQARNSRA GFRQLPLDKA LMSKFRSKLK  780
EWYQHHKDFV FDEDNNWMLQ GWKGRILYAS SCWV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5b3h_A	3e-51	420	814	1	378	Protein SCARECROW
5b3h_D	3e-51	420	814	1	378	Protein SCARECROW
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029144263.1	0.0	scarecrow-like protein 34
TrEMBL	A0A445BVW6	0.0	A0A445BVW6_ARAHY; Uncharacterized protein
STRING	XP_004486993.1	0.0	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07530.1	0.0	SCARECROW-like 14