PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy016695

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Dof

Protein Properties

Length: 167aa MW: 18331.2 Da PI: 10.1905

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59555039	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.2	2.5e-40	39	100	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss Ahy016695 39 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 100 57999*****************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-24	31	88	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.2E-34	40	97	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.264	43	97	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	45	81	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence Send to blast
MDTAQWAQGI GVVKAMEGSS TKACSSSSSV LERRTRPVKD QALNCPRCNS TNTKFCYYNN 60 YSLSQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS TPASSPSSSL TNKNPKIIHQ 120 GQDLNLAYPP PPPPPHPHHD DSATEFLRSG INTTTNTSRG LNSFMPX

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016163291.1	1e-91	dof zinc finger protein DOF3.7
Refseq	XP_025667995.1	1e-91	dof zinc finger protein DOF3.7
Swissprot	Q8LAP8	4e-46	DOF46_ARATH; Dof zinc finger protein DOF4.6
TrEMBL	A0A445CB75	3e-90	A0A445CB75_ARAHY; Uncharacterized protein
STRING	XP_007136465.1	1e-61	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-36	Dof family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]