PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy016641
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 226aa    MW: 26035.3 Da    PI: 6.7199
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59541490PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.81.8e-081661992255
                SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
   Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                 +yp++ee+  L++ +gL+ +q+ +WF N+R ++
  Ahy016641 166 WPYPTEEEKLMLSEMTGLDIKQINNWFINQRKRH 199
                58*****************************885 PP
2ELK36.78.9e-13119140122
        ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                ELK++Ll+KYsgyL+sL++EF+
  Ahy016641 119 ELKEMLLHKYSGYLSSLRKEFL 140
                9********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF037907.8E-5221IPR005540KNOX1
SMARTSM012562.6E-252677IPR005541KNOX2
PfamPF037911.1E-242976IPR005541KNOX2
PfamPF037896.1E-9119140IPR005539ELK domain
SMARTSM011882.5E-6119140IPR005539ELK domain
PROSITE profilePS5121310.982119139IPR005539ELK domain
PROSITE profilePS5007111.936139202IPR001356Homeobox domain
SuperFamilySSF466891.2E-19141211IPR009057Homeodomain-like
SMARTSM003897.8E-12141206IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.8E-27144204IPR009057Homeodomain-like
PfamPF059201.8E-17159198IPR008422Homeobox KN domain
CDDcd000865.52E-11165203No hitNo description
PROSITE patternPS000270177200IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
XKVGAPPEVA SLLEEISRES HPMDTRRRQI GDDPELDDFM ESYCNVLHKY KEELSKPFNE  60
ATLFLCNIES QLSNLCKGTL TISLDTNNNH RSDEAAGSCS SEVEGIEFGY GTRGVGDKEL  120
KEMLLHKYSG YLSSLRKEFL KKRKKGKLPK DARIALMDWW NSHYRWPYPT EEEKLMLSEM  180
TGLDIKQINN WFINQRKRHW KPSSEMRFGV MEGVSGAAHG TILEHM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134143LRKEFLKKRK
2140144KKRKK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in shoot formation during early embryogenesis. {ECO:0000269|PubMed:10488233}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025618898.11e-169homeobox protein knotted-1-like 1
SwissprotQ9FP293e-83KNOS1_ORYSJ; Homeobox protein knotted-1-like 1
TrEMBLA0A445BL191e-167A0A445BL19_ARAHY; Uncharacterized protein
STRINGGLYMA20G22986.11e-106(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.13e-63KNOTTED1-like homeobox gene 6
Publications ? help Back to Top
  1. Park SH, et al.
    A Ds-insertion mutant of OSH6 (Oryza sativa Homeobox 6) exhibits outgrowth of vestigial leaf-like structures, bracts, in rice.
    Planta, 2007. 227(1): p. 1-12
    [PMID:17624547]