PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Ahy016633 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||||||
Protein Properties | Length: 250aa MW: 28796.9 Da PI: 7.2995 | ||||||||||||
Description | NAC family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 97.3 | 2.3e-30 | 5 | 77 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + ++ g+kk Lvfy g+apkg+kt+W+mheyrl Ahy016633 5 GEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGK--PKALGIKKALVFYAGKAPKGVKTNWIMHEYRL 77 579************************************98..778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 40.896 | 1 | 106 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.01E-36 | 3 | 106 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-15 | 9 | 77 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
XALYGEKEWY FFSPRDRKYP NGSRPNRAAG SGYWKATGAD KPIGKPKALG IKKALVFYAG 60 KAPKGVKTNW IMHEYRLANV DRSAANKLNN NNLRLDDWVL CRIYNKKGKI EKFNSATTGL 120 EQKLPKFSPG EILHYDHDHE HETKPKIIHN FSNNEHQLYM DTSDSVPRLH TDSSCSDHAV 180 SPDATCDKEV ESNPKWSNEL DMQLFDTFDF QPSNYDNSLP MNDDDLFGNQ FQMNQLMSFQ 240 DTFLFPQKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-50 | 2 | 112 | 64 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016171224.1 | 0.0 | NAC domain-containing protein 2 | ||||
Refseq | XP_025669469.1 | 0.0 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 4e-83 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A445C180 | 0.0 | A0A445C180_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA04G38560.1 | 1e-113 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 2e-80 | NAC family protein |