PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy016272 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | HSF | ||||||||
Protein Properties | Length: 164aa MW: 19115.3 Da PI: 9.1835 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 65.8 | 9.9e-21 | 7 | 62 | 38 | 102 |
HHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 38 kkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102 ++ p+yFkh+nf+SFvRQLn+YgFkkv ++ weF++++F+kg k+ll++i+r+k+ Ahy016272 7 ETFFPNYFKHNNFSSFVRQLNTYGFKKVVADR---------WEFANEYFRKGAKHLLCEIHRRKT 62 56789************************999.........**********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00415 | 5.0E-15 | 1 | 60 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Gene3D | G3DSA:1.10.10.10 | 2.2E-19 | 7 | 60 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Pfam | PF00447 | 1.6E-17 | 7 | 60 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
SuperFamily | SSF46785 | 1.25E-15 | 8 | 60 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
PRINTS | PR00056 | 4.0E-9 | 9 | 21 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
PRINTS | PR00056 | 4.0E-9 | 22 | 34 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
DLLSLPETFF PNYFKHNNFS SFVRQLNTYG FKKVVADRWE FANEYFRKGA KHLLCEIHRR 60 KTPHHHHHHH QENNNEALCW IDSSTTPTTI PSIPTSLLLP SPKSPSCSSL GGGTNSDHHH 120 HQHNHILAAL SEGNQRLRRK NLMLLSELTH MKNLYNDIIY FIQX |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000269|PubMed:16202242}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016193165.1 | 1e-110 | heat stress transcription factor B-4d | ||||
Refseq | XP_025642025.1 | 1e-110 | heat stress transcription factor B-4d | ||||
Swissprot | Q7XHZ0 | 1e-44 | HFB4B_ORYSJ; Heat stress transcription factor B-4b | ||||
TrEMBL | A0A445A9C7 | 6e-94 | A0A445A9C7_ARAHY; Uncharacterized protein | ||||
STRING | XP_007141514.1 | 2e-58 | (Phaseolus vulgaris) |
Publications ? help Back to Top | |||
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