PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy016197 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ZF-HD | ||||||||
Protein Properties | Length: 172aa MW: 18571.5 Da PI: 11.1999 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 57.7 | 2.6e-18 | 38 | 72 | 3 | 37 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegt 37 + YkeClkNhAa++Ggha+DGCgEfmps++++ + Ahy016197 38 VISYKECLKNHAATIGGHALDGCGEFMPSSSSNPS 72 579**************************777633 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.5E-14 | 39 | 72 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 17.033 | 41 | 90 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 2.0E-10 | 41 | 75 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 2.1E-17 | 41 | 72 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
XNSQQTQTPP PPTTNGSLKR HHPLPTTAIA AAPPLSMVIS YKECLKNHAA TIGGHALDGC 60 GEFMPSSSSN PSEATLPHLR RMWLPPQLPP PRPRIPPPPP PPPPPKLPQL LPPLIIAASP 120 PAWWTQPQHK PKHYKPKPKP ISKSNFKPII TTTRPTLSPL SSSSSVLLLP PP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15210.1 | 1e-13 | homeobox protein 30 |