PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy015793 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | AP2 | ||||||||
Protein Properties | Length: 492aa MW: 55003.9 Da PI: 8.0607 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.3 | 1.2e-15 | 259 | 318 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Ahy015793 259 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 318 78*******************655454478446*************************98 PP | |||||||
2 | AP2 | 48.4 | 2.4e-15 | 361 | 412 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Ahy015793 361 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 412 78****************988532...5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 3.01E-17 | 259 | 328 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 3.45E-21 | 259 | 328 | No hit | No description |
Pfam | PF00847 | 4.3E-12 | 259 | 318 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-29 | 260 | 332 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.177 | 260 | 326 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.4E-16 | 260 | 327 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-6 | 261 | 272 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.58E-24 | 361 | 422 | No hit | No description |
SuperFamily | SSF54171 | 7.19E-18 | 361 | 422 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 4.7E-10 | 361 | 412 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.6E-34 | 362 | 426 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.006 | 362 | 420 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-18 | 362 | 420 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-6 | 402 | 422 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence Send to blast |
MSNWLGFSLT PHLRIDEEFE RQNEERGNGG SYPPPVMPLR SDGSLCVADS FSRSAAPHEW 60 RYENAMGSGN SNEEGPKLED FLGCYSNPSP LAETKAFCQQ NRNQNQQNNF SKINMNVETS 120 SSLFQSFNPY NDSRSNHNHH HHHHALIAGN GVYKSSWLAQ TCCSSSSSAE ANQNSSSNNN 180 NNNGECNFQS LSLTMSPSSV QQQEQNGGVV VVSGMNHQVV LHNQHNQVDD DTRKRSIAKS 240 QGREPVPRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQVYLGGYD 300 KEEKAARAYD LAALKYWGPT THINFPLSTY EKELEEMKHM NRQEFVANLR RKSSGFSRGA 360 SVYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGTSAVTNFD 420 ISRYDVKRIC SSSTLIAGDL AKRSPKDSAL ATAEDFNSSG SAATPSQPTP LAITDGEQHS 480 DELSNMVWNG NX |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025618400.1 | 0.0 | AP2-like ethylene-responsive transcription factor AIL1 | ||||
Swissprot | Q1PFE1 | 1e-140 | AIL1_ARATH; AP2-like ethylene-responsive transcription factor AIL1 | ||||
TrEMBL | A0A445BMP7 | 0.0 | A0A445BMP7_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA16G00950.2 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-132 | AP2 family protein |
Publications ? help Back to Top | |||
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