PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy015464
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 239aa    MW: 26697.6 Da    PI: 8.8795
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59550169PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA534.6e-17138172135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C +C + +Tp+WR gp g+ktLCnaCG++y++ +l
  Ahy015464 138 CLHCAAEQTPQWRTGPMGPKTLCNACGVRYKSGRL 172
                99*****************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011412.295132168IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.9E-14132169IPR013088Zinc finger, NHR/GATA-type
SMARTSM004011.6E-16132182IPR000679Zinc finger, GATA-type
SuperFamilySSF577166.65E-15134196No hitNo description
CDDcd002021.16E-12137184No hitNo description
PfamPF003207.7E-15138172IPR000679Zinc finger, GATA-type
PROSITE patternPS003440138163IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
XAVDSCNSSI SGSSFRCFAG VDPQFSEEFC VPYDDVAELE WLSNFVEESF PAEEELKTLH  60
LISGVKPQTP QSSSSSDARN APLFHPETPL PAKARSKRSR AAPGDWSTRV VRVVKTDAEQ  120
RPAKKRDGAN SEASGRKCLH CAAEQTPQWR TGPMGPKTLC NACGVRYKSG RLVPEYRPAA  180
SPTFVSTKHS NSHRKVLELR RQKEMQHHRL IGQSSVFDIS NGEDSYLIHR HNRPDYRNV
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016170053.11e-178GATA transcription factor 9
RefseqXP_025673549.11e-178GATA transcription factor 9
SwissprotO826321e-74GATA9_ARATH; GATA transcription factor 9
TrEMBLA0A444Y8X71e-177A0A444Y8X7_ARAHY; GATA transcription factor
STRINGXP_007135644.11e-118(Phaseolus vulgaris)
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]