PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy015081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 454aa MW: 49938.8 Da PI: 6.9308 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00022 | 108 | 130 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp Cg sF++ ++ H t+ Ahy015081 108 YECPVCGNSFRSEDEVSEHVDTC 130 99****************99887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.10.20.90 | 5.8E-9 | 24 | 52 | No hit | No description |
PROSITE profile | PS50157 | 10.492 | 108 | 138 | IPR007087 | Zinc finger, C2H2 |
CDD | cd09212 | 2.40E-18 | 163 | 252 | No hit | No description |
SuperFamily | SSF143503 | 3.92E-17 | 165 | 253 | IPR018997 | PUB domain |
Pfam | PF09409 | 6.2E-16 | 168 | 243 | IPR018997 | PUB domain |
SMART | SM00580 | 3.5E-14 | 169 | 236 | IPR018997 | PUB domain |
SuperFamily | SSF54236 | 5.17E-14 | 314 | 427 | IPR029071 | Ubiquitin-related domain |
Gene3D | G3DSA:3.10.20.90 | 5.8E-9 | 331 | 425 | No hit | No description |
PROSITE profile | PS50033 | 11.785 | 343 | 427 | IPR001012 | UBX domain |
Pfam | PF00789 | 2.3E-5 | 343 | 423 | IPR001012 | UBX domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence Send to blast |
MDDVKDKMKG FMKKVNNSFT SSSSAKFKGQ GRVLGSSSSP SPPPYATANS TSTPRPRPLN 60 SNPTPPPHKA TASSAERDPK PPTSGFDPFD SFVTSSKRSQ NGYSLNVYEC PVCGNSFRSE 120 DEVSEHVDTC LSNNGERADV SQLADTGADS NAELEVCVGT YVSGKPSHGS IDILLKLLKN 180 VVREPENAKF RKIRLANPKI KEAIAEVIGG TELICFLGFE LKDENGETWA VMELPSEEQI 240 RLINKATLLL ESQQVSPKSE NLAAASADNI DAKPESKPID RQVKVFFAVP ETVAAKIELP 300 DSFYKLSVEE VRREAELRRK KIEESQLLIP KSLKEKQAKA AKKRYTKAII RVQFPDGVVL 360 QGVFSPWEPT MALYEFVSSA LKQPGLEFEL MHPVVVRRQA IPRFAKAGEN SKTLEDEDLV 420 PSALIKFKPL ETDSVVFTGL KNELLQISEP LVNA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5ifw_A | 5e-16 | 298 | 427 | 23 | 146 | Tether containing UBX domain for GLUT4 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015957231.1 | 0.0 | plant UBX domain-containing protein 2 | ||||
Swissprot | Q9ZU93 | 0.0 | PUX2_ARATH; Plant UBX domain-containing protein 2 | ||||
TrEMBL | A0A444ZU93 | 0.0 | A0A444ZU93_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA08G04760.6 | 0.0 | (Glycine max) |
Publications ? help Back to Top | |||
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