PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy015056
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ZF-HD
Protein Properties Length: 284aa    MW: 30459.2 Da    PI: 9.3273
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59545858PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.42.3e-304198359
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59
                  v+YkeClkNhAa+lGgha+DGCgEfmp+++++ g+++++kCaACg  RnFHRre+e+
    Ahy015056 41 LVVYKECLKNHAAALGGHALDGCGEFMPAPTATaGDPTSIKCAACGWPRNFHRREPED 98
                 589****************************999********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047701.1E-244296IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257742.0E-144298IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015662.3E-274495IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152324.734495IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466891.18E-18173240IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-30174241IPR009057Homeodomain-like
TIGRFAMsTIGR015651.9E-27179236IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
TTTTTTIPNT PTPSKALTFS NGVLKRHHPH HISAANHHHQ LVVYKECLKN HAAALGGHAL  60
DGCGEFMPAP TATAGDPTSI KCAACGWPRN FHRREPEDPL ISSAFEFHSQ NRHHPPPPPP  120
PPPHRSPNSA SPPPISSAYY HHPSAAPHML LALSGAGIAA PPESTAAPIS AAAALASPRK  180
RFRTKFSQEQ KEKMHKFAER VGWKMQKRDD DLVQEFCSEV GVDRGVLKVW MHNNKNNLAK  240
KESNGAAVTT INGGVGVLGS GGGSRSIIME EDPNNNNNNN GNGC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A6e-241802371875ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025649932.10.0zinc-finger homeodomain protein 9
SwissprotQ9LXG01e-63ZHD8_ARATH; Zinc-finger homeodomain protein 8
TrEMBLA0A444ZPZ60.0A0A444ZPZ6_ARAHY; Uncharacterized protein
STRINGXP_004489395.12e-83(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.13e-46homeobox protein 34
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]