PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy015056 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ZF-HD | ||||||||
Protein Properties | Length: 284aa MW: 30459.2 Da PI: 9.3273 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 96.4 | 2.3e-30 | 41 | 98 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 v+YkeClkNhAa+lGgha+DGCgEfmp+++++ g+++++kCaACg RnFHRre+e+ Ahy015056 41 LVVYKECLKNHAAALGGHALDGCGEFMPAPTATaGDPTSIKCAACGWPRNFHRREPED 98 589****************************999********************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.1E-24 | 42 | 96 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 2.0E-14 | 42 | 98 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 2.3E-27 | 44 | 95 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 24.73 | 44 | 95 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
SuperFamily | SSF46689 | 1.18E-18 | 173 | 240 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.3E-30 | 174 | 241 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01565 | 1.9E-27 | 179 | 236 | IPR006455 | Homeodomain, ZF-HD class |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence Send to blast |
TTTTTTIPNT PTPSKALTFS NGVLKRHHPH HISAANHHHQ LVVYKECLKN HAAALGGHAL 60 DGCGEFMPAP TATAGDPTSI KCAACGWPRN FHRREPEDPL ISSAFEFHSQ NRHHPPPPPP 120 PPPHRSPNSA SPPPISSAYY HHPSAAPHML LALSGAGIAA PPESTAAPIS AAAALASPRK 180 RFRTKFSQEQ KEKMHKFAER VGWKMQKRDD DLVQEFCSEV GVDRGVLKVW MHNNKNNLAK 240 KESNGAAVTT INGGVGVLGS GGGSRSIIME EDPNNNNNNN GNGC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wh7_A | 6e-24 | 180 | 237 | 18 | 75 | ZF-HD homeobox family protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025649932.1 | 0.0 | zinc-finger homeodomain protein 9 | ||||
Swissprot | Q9LXG0 | 1e-63 | ZHD8_ARATH; Zinc-finger homeodomain protein 8 | ||||
TrEMBL | A0A444ZPZ6 | 0.0 | A0A444ZPZ6_ARAHY; Uncharacterized protein | ||||
STRING | XP_004489395.1 | 2e-83 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 3e-46 | homeobox protein 34 |
Publications ? help Back to Top | |||
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