PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy014922 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 178aa MW: 20641.9 Da PI: 10.1234 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 89.4 | 4.8e-28 | 30 | 115 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk++GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk+++dgkw+v+++e++HnHel p Ahy014922 30 FYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRQDGKWYVYRFEKDHNHELLP 115 9***************************************999877....9************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 6.9E-26 | 30 | 115 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
MTDTSVFMGT TILEPRNDME FESHEAAYAF YKEYAKSAGF GTAKLSSRRS RASKEFIDAK 60 FSCIRYGNKQ QSDDAINPRP SPKIGCKASM HVKRRQDGKW YVYRFEKDHN HELLPAQAHF 120 FRSHRSSDPP SNDVRMRRRK NSTTVSKLFS AYQNVDCLEN FMKNQHDRGR SLILEPGX |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025613823.1 | 1e-126 | protein FAR1-RELATED SEQUENCE 4 | ||||
Refseq | XP_025613824.1 | 1e-126 | protein FAR1-RELATED SEQUENCE 4 | ||||
Swissprot | Q6NQJ7 | 2e-76 | FRS4_ARATH; Protein FAR1-RELATED SEQUENCE 4 | ||||
TrEMBL | A0A0R0GZ19 | 1e-107 | A0A0R0GZ19_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA13G41660.1 | 1e-107 | (Glycine max) |
Publications ? help Back to Top | |||
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