PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ahy014914 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27470.2 Da PI: 7.0975 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.5 | 2.1e-15 | 9 | 60 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Ahy014914 9 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 60 57****************988532...5************************998 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 7.6E-11 | 9 | 60 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.77E-26 | 9 | 70 | No hit | No description |
SuperFamily | SSF54171 | 1.05E-18 | 9 | 70 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 19.177 | 10 | 68 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-35 | 10 | 74 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-19 | 10 | 68 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-5 | 11 | 22 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-5 | 50 | 70 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence Send to blast |
XSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDVAAIKFRG 60 SNAVTNFDIS RYDVERIMGS NTLLAGELAR RNNKDTAIEP PRWEAIEYNT NVEAVQARNN 120 NNDNTNNNND VDSNWKMVSG GAFSVGIHDL IGIEGQHQHQ HQHHQQQPLM EASSLVTSLS 180 SSREASPDKI MGPSSMIFPK PLQLEPKMVL NNPLTSTGVV GSWFPSQMRP ASAAISLSHL 240 PVFAAWNDT |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Acts as positive regulator of adventitious (crown) root formation by promoting its initiation. Promotes adventitious root initiation through repression of cytokinin signaling by positively regulating the two-component response regulator RR1. Regulated by the auxin response factor and transcriptional activator ARF23/ARF1. {ECO:0000269|PubMed:21481033}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by auxin. {ECO:0000269|PubMed:21481033}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016163883.1 | 1e-148 | AP2-like ethylene-responsive transcription factor ANT isoform X2 | ||||
Swissprot | Q84Z02 | 7e-65 | CRL5_ORYSJ; AP2-like ethylene-responsive transcription factor CRL5 | ||||
TrEMBL | A0A445C8D8 | 1e-144 | A0A445C8D8_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA06G05170.2 | 3e-83 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37750.1 | 4e-56 | AP2 family protein |
Publications ? help Back to Top | |||
---|---|---|---|
|