PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014796
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 288aa    MW: 32871.7 Da    PI: 7.5521
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59558912PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.2e-181259148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l+++++ +G g+W+++++  g+ R++k+c++rw +yl
        Ahy014796 12 KGLWSPEEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 59
                     678*******************************************97 PP
2Myb_DNA-binding48.91.5e-1565108146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++++eE++l++++++ lG++ W+ Ia++++ gRt++++k+ w++
        Ahy014796  65 RGAFSQEEEDLIIELHAVLGNR-WSQIAARLP-GRTDNEIKNLWNS 108
                      89********************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-27462IPR009057Homeodomain-like
PROSITE profilePS5129418.288759IPR017930Myb domain
SuperFamilySSF466891.68E-2910106IPR009057Homeodomain-like
SMARTSM007172.9E-121161IPR001005SANT/Myb domain
PfamPF002497.8E-161259IPR001005SANT/Myb domain
CDDcd001671.01E-101559No hitNo description
PROSITE profilePS5129426.09260114IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.6E-2663114IPR009057Homeodomain-like
SMARTSM007178.5E-1464112IPR001005SANT/Myb domain
PfamPF002491.8E-1465109IPR001005SANT/Myb domain
CDDcd001679.36E-1067107No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
RHSCCYKQKL RKGLWSPEED EKLLNYITNH GHGCWSSVPK LAGLQRCGKS CRLRWINYLR  60
PDLKRGAFSQ EEEDLIIELH AVLGNRWSQI AARLPGRTDN EIKNLWNSCL KKKLRQKGID  120
PITNKPLSDV VPIENNKNKK EEEEKPPTTT ERFEGPPSDS VGGYFSFNYQ QMMNNFGATP  180
PNATSSDANF VANNILTWEQ EEVKWCEYLN TLLLNNTVVQ NHSSSSSHSV MYGGGGGEVI  240
TEPETTSFMR QDSSSSSWHH HSQQQPHQFS DMYTKDLQRF SVAFGQSM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-28101145108B-MYB
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109115LKKKLRQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that coordinates a small network of downstream target genes required for several aspects of plant growth and development, such as xylem formation and xylem cell differentiation, and lateral root formation (PubMed:22708996). Regulates a specific set of target genes by binding DNA to the AC cis-element 5'-ACCTAC-3' (PubMed:23741471). Functions as a transcriptional regulator of stomatal closure. Plays a role the regulation of stomatal pore size independently of abscisic acid (ABA) (PubMed:16005292). Required for seed coat mucilage deposition during the development of the seed coat epidermis (PubMed:19401413). Involved in the induction of trichome initiation and branching by positively regulating GL1 and GL2. Required for gibberellin (GA) biosynthesis and degradation by positively affecting the expression of the enzymes that convert GA9 into the bioactive GA4, as well as the enzymes involved in the degradation of GA4 (PubMed:28207974). {ECO:0000269|PubMed:16005292, ECO:0000269|PubMed:19401413, ECO:0000269|PubMed:22708996, ECO:0000269|PubMed:23741471, ECO:0000269|PubMed:28207974}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015939577.10.0transcription factor MYB61
RefseqXP_015939578.10.0transcription factor MYB61
RefseqXP_025618778.10.0transcription factor MYB61
RefseqXP_025618779.10.0transcription factor MYB61
RefseqXP_025618780.10.0transcription factor MYB61
SwissprotQ8VZQ24e-85MYB61_ARATH; Transcription factor MYB61
TrEMBLA0A445BLF00.0A0A445BLF0_ARAHY; Uncharacterized protein
STRINGXP_004495813.14e-99(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G57560.12e-88myb domain protein 50
Publications ? help Back to Top
  1. Heyndrickx KS,Vandepoele K
    Systematic identification of functional plant modules through the integration of complementary data sources.
    Plant Physiol., 2012. 159(3): p. 884-901
    [PMID:22589469]
  2. Matías-Hernández L, et al.
    AaMYB1 and its orthologue AtMYB61 affect terpene metabolism and trichome development in Artemisia annua and Arabidopsis thaliana.
    Plant J., 2017. 90(3): p. 520-534
    [PMID:28207974]