PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy014401

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

C2H2

Protein Properties

Length: 319aa MW: 34008.5 Da PI: 7.6683

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59542866	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	2	24	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + Ahy014401 2 WKCEKCNKKYAVQSDWKAHSKIC 24 58*****************9876 PP
2	zf-C2H2	12	0.00062	32	50	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + Ahy014401 32 DCGTVFSRRDSFITHRAFC 50 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
XWKCEKCNKK YAVQSDWKAH SKICGTKEYK CDCGTVFSRR DSFITHRAFC DALADENNKV 60 NNEGGVLGHF PKIGSNLLQP LIPNLVASLP ITRNNTSIST SEFKQHPSSF PHELMPISMP 120 EQKPFINTTT TNNNHLINPS SLPSLQLNSP HSPLNMFDES GGVHLAAGLP HMSATALLQK 180 AAQMGATSVS NNNNNTSMAP PSFASSNNGI IMEHFMHNAH PQHDNISPSH QFNNNNNFNG 240 SVGMNGVEMF NAILDQSKAL AKIIDQNNRS SGFSIPPVSG RSSSTINIGG ANKGSDDVMT 300 LDFLGIGAGG AGGGGGGGX

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5b3h_C	2e-32	2	62	7	67	Zinc finger protein JACKDAW
5b3h_F	2e-32	2	62	7	67	Zinc finger protein JACKDAW
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025603671.1	0.0	zinc finger protein GAI-ASSOCIATED FACTOR 1
TrEMBL	A0A445CNH3	0.0	A0A445CNH3_ARAHY; Uncharacterized protein
STRING	XP_007144938.1	3e-98	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	9e-35	indeterminate(ID)-domain 2