PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014348
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 298aa    MW: 32985.6 Da    PI: 8.2373
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59539916PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS162.73.1e-50472882218
       GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseela.alkl..fsevsPilkfshlta 98 
                ++lLl+cA a++s+d +laq++++ l++ asp+gd++qRl++ f++AL +r +r +++     + + +s +n +++l+ +++l  ++++ P+++f++ + 
  Ahy014348  47 EKLLLHCASALESNDVTLAQQVMWVLNNVASPTGDTNQRLTSWFLRALISRASRICPTAL---SFKGSS-NNIQRRLMtVTELagYVDLIPWHRFGFCAS 142
                689***************************************************555544...344443.444444440444478*************** PP

       GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.............. 181
                N+ I +a+ g +rvHi+Df+i++++QWp++++aLa+ pegppslRiT+ +   ++    + +++e+g rLa+fA+  +vpfefnv+              
  Ahy014348 143 NNEIFKAILGFQRVHILDFSITHCMQWPTFIDALAKSPEGPPSLRITVPSFRPPVpplVNVSTHEVGLRLANFAKFRDVPFEFNVIgnnlgpllapnnse 242
                ***********************************************9888666678999**************************************** PP

       GRAS 182 .........vakrledleleeLrvkpgEalaVnlvlqlhrlldesv 218
                         v++ l+ l+++ L+++ +Eal++n++  l +l d++ 
  Ahy014348 243 lsnestsfhVESLLSLLNPSVLNLRDDEALVINCQNWLRYLSDDRK 288
                99999999666688999******************99999887654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098531.81220298IPR005202Transcription factor GRAS
PfamPF035141.1E-4747288IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MHSMKAELKG ASSISFQNHS LFNTAPHSSL TGALKGCLGS LDGACIEKLL LHCASALESN  60
DVTLAQQVMW VLNNVASPTG DTNQRLTSWF LRALISRASR ICPTALSFKG SSNNIQRRLM  120
TVTELAGYVD LIPWHRFGFC ASNNEIFKAI LGFQRVHILD FSITHCMQWP TFIDALAKSP  180
EGPPSLRITV PSFRPPVPPL VNVSTHEVGL RLANFAKFRD VPFEFNVIGN NLGPLLAPNN  240
SELSNESTSF HVESLLSLLN PSVLNLRDDE ALVINCQNWL RYLSDDRKGN HRCLSLRX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_B2e-304027627247Protein SHORT-ROOT
5b3h_E2e-304027627247Protein SHORT-ROOT
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016171942.10.0scarecrow-like protein 32
RefseqXP_025673112.10.0scarecrow-like protein 32
RefseqXP_025673113.10.0scarecrow-like protein 32
TrEMBLA0A444Y6N90.0A0A444Y6N9_ARAHY; Uncharacterized protein
STRINGXP_007149938.11e-175(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.14e-64GRAS family protein