PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy014220 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 257aa MW: 28019 Da PI: 4.8617 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00034 | 104 | 126 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H Ahy014220 104 FSCNYCQRKFFSSQALGGHQNAH 126 89*****************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 2.94E-6 | 102 | 131 | No hit | No description |
PROSITE profile | PS50157 | 11.344 | 104 | 131 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 106 | 126 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MKPRFDLELE ASAAEYESEV SSQVASNISS LQETSAGPST DTLTNSYKLA NPMEFDALSL 60 DLTLSFGNNE TGEKAGDSIG LSFSSTSESS NEPTFQTGTV PRVFSCNYCQ RKFFSSQALG 120 GHQNAHKRER TLAKRAMRMG LFSERYASLA SLPLHGSFRS LGIKAHSSVH HQAFAPSIRP 180 PEIKTNARFD QGYVGLPIFL EDDESELLWP GSFRQVTSEG GDSNQAFMLA GSSNLSFTEV 240 NPPVEIDNST PELTLKL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development. {ECO:0000269|PubMed:24808098}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016190356.1 | 0.0 | zinc finger protein 4 | ||||
Refseq | XP_016190357.1 | 0.0 | zinc finger protein 4 | ||||
Refseq | XP_025638598.1 | 0.0 | zinc finger protein 4 | ||||
Refseq | XP_025638599.1 | 0.0 | zinc finger protein 4 | ||||
Swissprot | Q39263 | 6e-52 | ZFP4_ARATH; Zinc finger protein 4 | ||||
TrEMBL | A0A444ZVT4 | 0.0 | A0A444ZVT4_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA14G39280.4 | 1e-129 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66140.1 | 1e-53 | zinc finger protein 4 |
Publications ? help Back to Top | |||
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