PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy014072

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 337aa MW: 35438.1 Da PI: 8.0843

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59521572	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.2	4.4e-11	271	316	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L+el+P+ +k s a++L +Av++Ik Lq Ahy014072 271 SIAERERRTRISGKLKKLQELVPNM----DKQTSYADMLDLAVQHIKGLQ 316 689*******************7....688***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	13.98	265	315	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.7E-14	268	328	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.12E-11	269	320	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.8E-13	270	328	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.2E-12	271	321	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.7E-8	271	316	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
MYQPSSSSSS SSQAHNSTVS EPALTRYGSA PGSLLRTAVD AVIAGGAGGP RHPHPLMPTG 60 SHYFSGESSE STSKVNDNSK DHNLHRSYGL QQDAFAGSSS SSSSLLRQRS SPAGFLSNLA 120 DNAGGGGGGG GGGFTITRGG GGSGGGNYGS NSGRLKSQMS FTGQDSLSQI SEVSESVVVD 180 ASTSERAYAM DHCWDNSNSN SSSIVFSAPP SKRSKNIDGD ILNCLTALDS QYSLPQTALE 240 MATMEKLMHI PEDSVPCKIR AKRGCATHPR SIAERERRTR ISGKLKKLQE LVPNMDKQTS 300 YADMLDLAVQ HIKGLQTQVQ KLHTELDNCT CGCKPSS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025675840.1	0.0	transcription factor bHLH128 isoform X2
Swissprot	Q8H102	1e-82	BH128_ARATH; Transcription factor bHLH128
TrEMBL	A0A444XUN9	0.0	A0A444XUN9_ARAHY; Uncharacterized protein
STRING	XP_008380690.1	1e-125	(Malus domestica)

Publications ? help Back to Top
Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281]