PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013943
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 510aa    MW: 58801 Da    PI: 7.972
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59543024PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-26593PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.41.7e-1536125298
                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                fk+   s +l+ g l +p +f++++g     s  + l+ ++g +W+v+   +k++++++l+ GW+eF+    L+ g  + F+++++s+f   v++++
  Ahy013943  36 FKII-LSTALEDGKLKIPTSFTRKYGDG--LSNPVFLKPPDGTEWKVEW--TKHDDGIFLEHGWNEFAMYYSLDHGHLLFFEYKNTSQF--EVQICE 125
                4443.488899999***********755..6667***************..********************************998999..898886 PP
2B353.93.3e-17254339195
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                f  +++ps++++ + + +p kf++++ +k+    t +le    gr+W v++  + ++    +++GWk+F+k+n L++gD++vF+l++ ++  ++v+
  Ahy013943 254 FMVIMKPSYANSYS-MNIPSKFTAKYLKKH---ATAILEVhDGGRTWAVTY--SFGK----FSSGWKRFAKDNSLNVGDICVFELTNPKDLYFKVS 339
                66788888888887.***********5443...35666662466*******..5555....789********************987677755555 PP
3B345.31.5e-14413507198
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                ff + ++++ l+++r ++p  f++++ +k +    ++       +W++kl +y+++++ ++l++GW+ F++  +Lk+gD+++F+l++++++ + v++fr
  Ahy013943 413 FFMIIIKPSFLRQRRPSIPAFFIRNYLKK-TH---IVTFKFGETRWRIKLlRYTRYRSPITLSNGWSLFCRGSRLKAGDVCIFELINKEDAVFDVHLFR 507
                7778899999*************988544.33...4444457799****9777999999***************************9999988888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.88E-2029126IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.5E-2031125IPR015300DNA-binding pseudobarrel domain
CDDcd100171.35E-1434124No hitNo description
PROSITE profilePS5086313.25334127IPR003340B3 DNA binding domain
SMARTSM010193.7E-1535127IPR003340B3 DNA binding domain
PfamPF023625.1E-1336125IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.1E-21246342IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.26E-21249347IPR015300DNA-binding pseudobarrel domain
CDDcd100174.67E-20252342No hitNo description
PROSITE profilePS5086313.084253344IPR003340B3 DNA binding domain
PfamPF023621.9E-14254340IPR003340B3 DNA binding domain
SMARTSM010191.3E-17254344IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.6E-17406507IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.73E-16407508IPR015300DNA-binding pseudobarrel domain
CDDcd100171.62E-14412507No hitNo description
PfamPF023623.8E-12413507IPR003340B3 DNA binding domain
PROSITE profilePS5086311.998413509IPR003340B3 DNA binding domain
SMARTSM010194.8E-9413509IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
SILHYNIGEP EKLRKMNEED QATPPPMNNS NAVLFFKIIL STALEDGKLK IPTSFTRKYG  60
DGLSNPVFLK PPDGTEWKVE WTKHDDGIFL EHGWNEFAMY YSLDHGHLLF FEYKNTSQFE  120
VQICEVSGLE IDYPFHVIQQ ENENIEQINH EADQVFDDMP QSQNNRMKSP MFYPQPSNTT  180
REVRTSCSLQ NLPLIHQING NECQGTSFDK STFASIKKEL DEDIGGSTPC PRVERLKQTL  240
NKATTSKSKQ NPSFMVIMKP SYANSYSMNI PSKFTAKYLK KHATAILEVH DGGRTWAVTY  300
SFGKFSSGWK RFAKDNSLNV GDICVFELTN PKDLYFKVSI TRIEEEELPL SQVEGDRVNC  360
LEPAKVNYVE SKSDIMIKVK KETQETSLAT PPGFEPNEEA LKEAKKFTSE NPFFMIIIKP  420
SFLRQRRPSI PAFFIRNYLK KTHIVTFKFG ETRWRIKLLR YTRYRSPITL SNGWSLFCRG  480
SRLKAGDVCI FELINKEDAV FDVHLFRCHS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4i1k_A1e-1223434530144B3 domain-containing transcription factor VRN1
4i1k_B1e-1223434530144B3 domain-containing transcription factor VRN1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624959.10.0B3 domain-containing transcription factor VRN1
TrEMBLA0A444XAP40.0A0A444XAP4_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-34B3 family protein