PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ahy013821 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 231aa MW: 25481.5 Da PI: 4.9763 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.1 | 0.0013 | 22 | 42 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cg +F++++ +H r H Ahy013821 22 CHKCGWPFPNPHPSAKHRRAH 42 *****************9998 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE pattern | PS00028 | 0 | 22 | 42 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence Send to blast |
MDTEDQRKTH TPGHESHGVH LCHKCGWPFP NPHPSAKHRR AHKKICGTIE GYKLCSSEEQ 60 SRSNGSDDGH GSDDDKKSPG PEVLNIGNKE KDDSGIGDKV NRSEDEVFSD AVADFSDSQG 120 VKESLQEGSL DSSTSVERDG KDDPKFSRSS KESDFNDAVE SQLTVESRDG SQNQHTKILQ 180 GERVEEENLP ELQDQLSGST ATSLSDFIAD LRAKDWLRTK GILCFMKHTQ G |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020995192.1 | 1e-132 | uncharacterized protein LOC107482315 isoform X4 | ||||
TrEMBL | A0A444ZS37 | 1e-128 | A0A444ZS37_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA08G11280.2 | 4e-77 | (Glycine max) |