PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013575
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 364aa    MW: 40336.9 Da    PI: 6.0082
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59558790PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS165.83.5e-511403522216
       GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                +e L+++A+++++++l+ a+ +L+rl+++ +sp+g +p+qR+a+yf+eAL+  l++      +  +p+ +s  + ++ +  +k+fs +sPi+ fs +t+N
  Ahy013575 140 IEELIRAADCFDTNHLHVAHVILERLNQRlRSPAGaKPLQRAAFYFKEALQGLLSG------SNRTPRFSSLVEIVHCVRTFKAFSGISPIPMFSIFTTN 233
                679*************************99*****99******************9......4445555554456666677777**************** PP

       GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                qa+lea++g++ +H++Dfdi+ G+Q+++L++++a+++    +g+p lRiT+v+++e   + e + ++e+L++fA+el+++++ +++   ++e+l++++ +
  Ahy013575 234 QALLEAFHGSSFMHVLDFDIGLGIQYASLMKEIAEKAdslkHGSPLLRITAVVPEE--YAVESKLIRENLSQFAHELRIRVQVEFVPLCNFETLSFKAVK 331
                ************************************9888889***********66..99999**********************8888*********** PP

       GRAS 196 vkpgEalaVnlvlqlhrllde 216
                +  gE++aV l+ +++r l  
  Ahy013575 332 FVDGEKTAVLLSPAIFRRLGT 352
                ************999998854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098528.643113364IPR005202Transcription factor GRAS
PfamPF035141.2E-48140352IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MRVPVSSSQN NKPVESTIGL EPTSVLDLCR SPTPEKAVAA LVATAPNTQQ ECLDQLEDHV  60
LHNLDWDSIM KDLGFHEDSN PPLFKTTLPN VPDFSPSFDP HSEFPDIQTM SYNYANATAT  120
LDHLLHDTSN NSAATGFDFI EELIRAADCF DTNHLHVAHV ILERLNQRLR SPAGAKPLQR  180
AAFYFKEALQ GLLSGSNRTP RFSSLVEIVH CVRTFKAFSG ISPIPMFSIF TTNQALLEAF  240
HGSSFMHVLD FDIGLGIQYA SLMKEIAEKA DSLKHGSPLL RITAVVPEEY AVESKLIREN  300
LSQFAHELRI RVQVEFVPLC NFETLSFKAV KFVDGEKTAV LLSPAIFRRL GTAGSPAAFL  360
ARGW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_A1e-1214532024195Protein SCARECROW
5b3h_D1e-1214532024195Protein SCARECROW
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020979252.10.0scarecrow-like protein 15
RefseqXP_025653092.10.0scarecrow-like protein 15
SwissprotO232103e-93SCL15_ARATH; Scarecrow-like protein 15
TrEMBLA0A444Z9R30.0A0A444Z9R3_ARAHY; Uncharacterized protein
STRINGXP_007156910.11e-150(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-95GRAS family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]