PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy013532

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

TCP

Protein Properties

Length: 282aa MW: 29980.3 Da PI: 7.289

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59523279	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.4	8.7e-41	67	180	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 ++ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ Ahy013532 67 TAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksaphtfhaa 166 5679*****************************************************************9998888888888855555444444555444 PP TCP 89 .............k 89 + Ahy013532 167 alalahhhpsyeeA 180 44333333333330 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	3.8E-40	72	198	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	28.496	73	127	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
XNNNNNSSLV VPFDGATTAT GRPFIMGGSI SSSSSSSSSS SNSTSSSTTI DANLAIATRS 60 DDNQLQTAPK RSTKDRHTKV DGRGRRIRMP ATCAARVFQL TRELGHKSDG ETIEWLLQQA 120 EPAIIAATGT GTIPANFSTL NVSLRSSGST LSAPPSKSAP HTFHAAALAL AHHHPSYEEA 180 FHPHTALLGF HPHHAQHQHL MTADQIAEAL PGGAADSSEN YMRKRFREDL FKDESNHQSE 240 SQNNESGGTG AVAADGSSPK PFKTNLQMQL QQQQPQPEGG GX

Functional Description ? help Back to Top
Source	Description
UniProt	Can specifically bind site II elements in the promoter region of PP438/PNM1. {ECO:0000269\|PubMed:21297037}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016197271.1	0.0	transcription factor TCP8
Refseq	XP_016197274.1	0.0	transcription factor TCP8
Refseq	XP_025645646.1	0.0	transcription factor TCP8
Swissprot	Q9C518	3e-63	TCP8_ARATH; Transcription factor TCP8
TrEMBL	A0A444ZC14	0.0	A0A444ZC14_ARAHY; Uncharacterized protein
STRING	GLYMA12G28970.2	1e-101	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-58	TCP family protein

Publications ? help Back to Top
Mazur MJ, et al. Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci. Front Plant Sci, 2017. 8: p. 2043 [PMID:29250092]