PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy013308

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 480aa MW: 54061.7 Da PI: 6.799

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58455516	PU_ref	Unigene	View CDS
gnl\|UG\|Ahy#S59554554	PU_unref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-1630890	PU_unref	plantGDB	View CDS
PUT-171a-Arachis_hypogaea-22627	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.8	6.8e-24	112	219	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.....................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessst 78 +Wt+ +v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ Ahy013308 112 KWTDAMVRLLIMAVYYIGDEAGSEGvggggggggdpsgkkkntgllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVEN 211 7************9999998765566778888899999999999******************************************55** PP trihelix 79 cpyfdqle 86 ++++ ++ Ahy013308 212 QSFLETMD 219 **9997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	3.5E-21	110	244	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence Send to blast
GNGIGSVIYT SINTSLLGIE NNTLQQNPHN NLHHQPPPPQ MVYSTHHDTE SHPSQQQQQQ 60 QPQQAMKHGY PYSSKKPQSS TFSDEDEPGG GFGADESSGD PKRKASPWHR MKWTDAMVRL 120 LIMAVYYIGD EAGSEGVGGG GGGGGDPSGK KKNTGLLQKK GKWKSVSRAM MEKGFYVSPQ 180 QCEDKFNDLN KRYKRVNDIL GKGTACRVVE NQSFLETMDL SPKMKEEVRK LLNSKHLFFR 240 EMCAYHNSCG HGGGAAAVTA AGGNGQHSAE AGTEQPLHIQ QPQPPQHQQG QQRCFHSSVN 300 GVGMLKEDDD DEEDDESDDF SDEDEEESGE GGGSRGQVED DENDVVRSRK RHRNKGGFCV 360 TSSSTSASQL MQQLNNEVAG VLQDGGKNPW EKKQWMKKRV LQLEEQQVRY HVEAFELEKQ 420 RLKWVRFSSK KERDMERDKL ENERRRLENE RLLLLLRQKE LEFTALHHLK HQQQQQHSST

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence Send to blast

GNGIGSVIYT SINTSLLGIE NNTLQQNPHN NLHHQPPPPQ MVYSTHHDTE SHPSQQQQQQ  60
QPQQAMKHGY PYSSKKPQSS TFSDEDEPGG GFGADESSGD PKRKASPWHR MKWTDAMVRL  120
LIMAVYYIGD EAGSEGVGGG GGGGGDPSGK KKNTGLLQKK GKWKSVSRAM MEKGFYVSPQ  180
QCEDKFNDLN KRYKRVNDIL GKGTACRVVE NQSFLETMDL SPKMKEEVRK LLNSKHLFFR  240
EMCAYHNSCG HGGGAAAVTA AGGNGQHSAE AGTEQPLHIQ QPQPPQHQQG QQRCFHSSVN  300
GVGMLKEDDD DEEDDESDDF SDEDEEESGE GGGSRGQVED DENDVVRSRK RHRNKGGFCV  360
TSSSTSASQL MQQLNNEVAG VLQDGGKNPW EKKQWMKKRV LQLEEQQVRY HVEAFELEKQ  420
RLKWVRFSSK KERDMERDKL ENERRRLENE RLLLLLRQKE LEFTALHHLK HQQQQQHSST

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016208080.1	0.0	uncharacterized protein LOC107648773
Refseq	XP_025657712.1	0.0	uncharacterized protein LOC112754312
TrEMBL	A0A444YP38	0.0	A0A444YP38_ARAHY; Uncharacterized protein
STRING	XP_007162836.1	1e-180	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	4e-69	sequence-specific DNA binding transcription factors