PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013212
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 501aa    MW: 56403.9 Da    PI: 5.0297
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542633PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.0004277300123
                EEETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                ++C++C+ +F  k+++ +H+ + H
  Ahy013212 277 FECHKCNVTFDEKDSYLQHLLSfH 300
                89******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.890.107.2E-6144198IPR001739Methyl-CpG DNA binding
PROSITE profilePS5098210.122144221IPR001739Methyl-CpG DNA binding
SuperFamilySSF541714.58E-8152209IPR016177DNA-binding domain
PfamPF014291.9E-4153200IPR001739Methyl-CpG DNA binding
PROSITE profilePS501578.663277305IPR007087Zinc finger, C2H2
SMARTSM003550.28277300IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280279300IPR007087Zinc finger, C2H2
PROSITE profilePS501579.64324351IPR007087Zinc finger, C2H2
SMARTSM003550.11324346IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280326346IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
SDDLGNAENR VIIDYLKQYI REDPKFDQVV FAPPSSASAL VAYHGGGAGE GRGELAMVKF  60
GERKRKRGRK PKVKVNLEES YSGMEIVNKN GVVINLMDLA KAEDPFAEEL RRRTDGLQGE  120
EELLGFLRDL EGQWGSRRRK KRRIVDAANF GDALPLGWKL ILGLKRKDGR AWIYCRRYIS  180
PSGQQFMSCR EVASYLQSLI GHSDAPLQIG HRSENFPQEQ RAITEHSAGV AHEDQREWQI  240
VVANSDVPSF SVSNERGMEL ALLGLENLAD VEIHDLFECH KCNVTFDEKD SYLQHLLSFH  300
QRTTRRYRLG SSLGDGVIIK DGKFECQFCH KVFSERRRYS SHVGIHVRSN VRQAEDSSGL  360
ENVQRTDKSP VREDMLLSRI SRMDALIEIA QSSIMEDCDM EPASKVAACS LDQDINFESE  420
QQMEDSLNGT NVVQVLNQQD SPELHMDVEE EETDDDSQVI DAKMVTCLDH TGLLCVNEKN  480
GNPSVEVFDK SGIDMGGASQ X
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16170ERKRKRGRKP
2136141RRRKKR
3136142RRRKKRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025622312.10.0uncharacterized protein LOC112714844
TrEMBLA0A445BAM40.0A0A445BAM4_ARAHY; Uncharacterized protein
STRINGXP_004485590.10.0(Cicer arietinum)