PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy012663 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 431aa MW: 48562.9 Da PI: 4.7604 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 103.8 | 2.2e-32 | 58 | 195 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd..iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...sgyWkatgkdk 90 lp+G++F+P+d+e++++ L k g+ ++++ + evd i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W++tg++k Ahy012663 58 LPKGVKFDPSDQEIIWHLLVKAGVGNLkphpfIDEFITTLEVDdgICYTHPQHLP-GVKQDGRASHFFHRAIKAYNTGTRKRRKVHgqdDVRWHKTGRTK 156 799************999988754444466554444444444345**********.778889999******************866455889******** PP NAM 91 evlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 ++ +g ++g+kk++v+y++ r k+ekt+Wvmh+y+l Ahy012663 157 LITL-NGVQKGCKKIMVLYTNavRGGKSEKTNWVMHQYHL 195 ****.999***********5434888889*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.83E-38 | 43 | 214 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 31.804 | 58 | 214 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.2E-14 | 59 | 195 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence Send to blast |
MAGASWLVDK SRIATKIKSA SGACDPNEVI WKTNPTRICP NCHHPIDNSD VTQEWPGLPK 60 GVKFDPSDQE IIWHLLVKAG VGNLKPHPFI DEFITTLEVD DGICYTHPQH LPGVKQDGRA 120 SHFFHRAIKA YNTGTRKRRK VHGQDDVRWH KTGRTKLITL NGVQKGCKKI MVLYTNAVRG 180 GKSEKTNWVM HQYHLGTEED EKEGEYVISK VFYKEDQDIP EAAESKNATV AKVDPVTPKS 240 TTPEPPRNER QDSDLGLDLD LGQEALVFTE MDCLDEIQAD CEESAKANPP VLETQENEGM 300 DNKETNAYEA QPWWDSDSQN LLDSQQLVEA LTLCEDIFHS QSSNKDDEND KNQTGLSVYA 360 HLGPEHLKKD IEECQKLAPA GPEHQKDIED GQNLDIDLAN IERDTPPEHR LSQLEFGSQD 420 SYTYWGFQGV N |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor regulating the transcriptional activation response to gamma irradiation (PubMed:19549833). Required for stem-cell death induced by UVB or by gamma irradiation (PubMed:20634150). Not required for ATM activation, but participates in pathways governed by both ATM and ATR sensor kinases (PubMed:19549833). Involved in DNA damage response (DDR) system that regulates cell cycle arrest (PubMed:24399300). Functional homolog of animal p53 (PubMed:24736489). Regulates SMR5 and SMR7 transcription (PubMed:24399300). Regulates DNA repair and cytokinin signaling separately and plays a key role in controlling lateral root formation under genotoxic stress. {ECO:0000269|PubMed:19549833, ECO:0000269|PubMed:20634150, ECO:0000269|PubMed:24399300, ECO:0000305|PubMed:24736489}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not induced by zeocin or ionizing radiation treatment. {ECO:0000269|PubMed:23907539}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025701794.1 | 0.0 | SUPPRESSOR OF GAMMA RESPONSE 1 | ||||
Swissprot | Q6NQK2 | 1e-155 | NAC8_ARATH; SUPPRESSOR OF GAMMA RESPONSE 1 | ||||
TrEMBL | A0A445CZY4 | 0.0 | A0A445CZY4_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA01G22510.1 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25580.1 | 1e-156 | NAC family protein |