PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy012492

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GRF

Protein Properties

Length: 383aa MW: 43828.2 Da PI: 7.813

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59551976	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.2e-25	84	127	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e Ahy012492 84 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 127 79***************************************997 PP
2	QLQ	56.2	1e-19	15	51	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT++Q+q+L++Q+l++Ky++ + P+Pp+L++ i++ Ahy012492 15 SPFTPNQWQELEQQALVFKYMVTGTPIPPDLIFSIKR 51 89*******************************9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00951	1.2E-12	15	51	IPR014978	Glutamine-Leucine-Glutamine, QLQ
PROSITE profile	PS51666	21.503	16	51	IPR014978	Glutamine-Leucine-Glutamine, QLQ
Pfam	PF08880	2.3E-14	16	49	IPR014978	Glutamine-Leucine-Glutamine, QLQ
PROSITE profile	PS51667	24.941	84	128	IPR014977	WRC domain
Pfam	PF08879	3.6E-21	85	127	IPR014977	WRC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence Send to blast
MSGSLSGSAR NSSRSPFTPN QWQELEQQAL VFKYMVTGTP IPPDLIFSIK RSLDSSISSR 60 LFPHHPSGAV GYAYFQMGFG RKVDPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGRN 120 RSRKPVEISS SSTTNTNTNT NNNNNTSSSQ VMNHHHQSSY TVNCSNDSNN NNNNMASSTA 180 CSFSFNPSES QQQHQYFSQS YQNPFFYTQS TSSSSSSKHH DADFPPHDAT THHLFMDSGS 240 YSHDQKDYRH IHGMREDVDE RAFFPEASGS ARSYLHDSYQ HHHHHQQQQQ HLSMGSYKNY 300 SSNSHFQIMN NNSNNDDPRN QEQHCFVLGT DFKSTSKEKD NTEKTTSTTQ QRPLHHFFGE 360 WPPKNTDSWL DLASNSRIPS SDE

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence Send to blast

MSGSLSGSAR NSSRSPFTPN QWQELEQQAL VFKYMVTGTP IPPDLIFSIK RSLDSSISSR  60
LFPHHPSGAV GYAYFQMGFG RKVDPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGRN  120
RSRKPVEISS SSTTNTNTNT NNNNNTSSSQ VMNHHHQSSY TVNCSNDSNN NNNNMASSTA  180
CSFSFNPSES QQQHQYFSQS YQNPFFYTQS TSSSSSSKHH DADFPPHDAT THHLFMDSGS  240
YSHDQKDYRH IHGMREDVDE RAFFPEASGS ARSYLHDSYQ HHHHHQQQQQ HLSMGSYKNY  300
SSNSHFQIMN NNSNNDDPRN QEQHCFVLGT DFKSTSKEKD NTEKTTSTTQ QRPLHHFFGE  360
WPPKNTDSWL DLASNSRIPS SDE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025677411.1	0.0	growth-regulating factor 5 isoform X1
TrEMBL	A0A445BMR1	0.0	A0A445BMR1_ARAHY; Uncharacterized protein
STRING	XP_007135443.1	1e-160	(Phaseolus vulgaris)