PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy012460 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | CAMTA | ||||||||
Protein Properties | Length: 629aa MW: 71118.5 Da PI: 4.7218 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 167.1 | 2.9e-52 | 10 | 127 | 2 | 118 |
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 ++e k+rwlk+ e++ iL n+++ ++t+ ++++p+ gsl+L+nr+++r+frkDGy+w+kk+dgktv E+he+LK+g+ve+l+cyYah+een++fqrr+yw Ahy012460 10 YQEaKRRWLKPVEVLYILRNHDQCKFTNIPPQKPTGGSLFLFNRRIMRFFRKDGYNWRKKRDGKTVGEAHERLKIGNVEILNCYYAHGEENRSFQRRSYW 109 567699********************************************************************************************** PP CG-1 101 lLeeelekivlvhylevk 118 +L+ ++e+ivlvhy+e+k Ahy012460 110 ILDPAYEHIVLVHYRETK 127 ***************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 75.457 | 6 | 132 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.4E-67 | 9 | 127 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 3.1E-46 | 12 | 125 | IPR005559 | CG-1 DNA-binding domain |
SuperFamily | SSF81296 | 4.72E-17 | 404 | 488 | IPR014756 | Immunoglobulin E-set |
Pfam | PF01833 | 7.1E-7 | 404 | 478 | IPR002909 | IPT domain |
Gene3D | G3DSA:2.60.40.10 | 7.7E-6 | 404 | 481 | IPR013783 | Immunoglobulin-like fold |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 629 aa Download sequence Send to blast |
GFEYNIDDLY QEAKRRWLKP VEVLYILRNH DQCKFTNIPP QKPTGGSLFL FNRRIMRFFR 60 KDGYNWRKKR DGKTVGEAHE RLKIGNVEIL NCYYAHGEEN RSFQRRSYWI LDPAYEHIVL 120 VHYRETKEGN SGSGPIPPLS EGCSPEFSQN RSSRTTLDPG TISVLGDSCE PSQNFSSTES 180 MEVTSNIIRN NGMDQLDETD AVLRQLKQQL SLEKENCEEI SPTYTEPEIL HDLNPQHDER 240 VMYKHKSAAF TVPNDYGQAA YECNGRQGDN GKNYNQILNC DCPDANENAL SWTEVLESCK 300 PASLTNLPEQ HAYEAYGNDS SLHSSRIVLI DSQENSQWIN SNSINAENSV FSCPQDGGTK 360 FPLYSPVEAE ELSSDYATLF HQIQIPPPLD ADSCLTISQK QKFTIRRIFP EWCYATETSK 420 VVIIGSFLCL PSNSTWACMF GDIEVPAEII QDGVICCEAP LHLPGKVTLC VTSGNRESCS 480 EFREFEFRNK TKSCTRCNSM ETETARSQDE LLLLVTFAQM LLSPPTIKND NMEPVYHLPV 540 EQKADDDSWS HVIEALLVGS GTSSGTIDWL LEELLKERLQ LWLSGKSREI DEATGCPLSK 600 KEQGIIHMVA GLGYEWALIP ILSCGVNIX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025645407.1 | 0.0 | calmodulin-binding transcription activator 4 isoform X1 | ||||
TrEMBL | A0A444ZBI9 | 0.0 | A0A444ZBI9_ARAHY; Uncharacterized protein | ||||
STRING | XP_004502279.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 1e-140 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |