PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy012103
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 296aa    MW: 32688.7 Da    PI: 7.4271
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58470343PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.21.2e-072442772154
                HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                k +yp+++++++L +++gL+ +q+ +WF N+R +
  Ahy012103 244 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 277
                469*****************************87 PP
2ELK25.53.1e-09198219122
        ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                ELK +L++++++++ ++++E++
  Ahy012103 198 ELKIELKQGFKSRIEDVREEIL 219
                9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012564.0E-2186141IPR005541KNOX2
PfamPF037911.5E-1689140IPR005541KNOX2
PROSITE profilePS512139.132198218IPR005539ELK domain
PROSITE profilePS5007111.71218281IPR001356Homeobox domain
SMARTSM003895.3E-11220285IPR001356Homeobox domain
SuperFamilySSF466893.17E-16220285IPR009057Homeodomain-like
CDDcd000861.39E-11221282No hitNo description
Gene3DG3DSA:1.10.10.604.0E-25225283IPR009057Homeodomain-like
PfamPF059201.1E-17238277IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MMQEPSLGMM GGGGGLGGEM SSATXVRRAA TAAAEGGDSN TPAVRAGSGS TRGVPESCNA  60
NRPASTYRRT AITITPCSSL ICLSTLSLSP HDRQDLDNFL AQYLIVLCTF KEQLQQHVRV  120
HAVEAVMACR DIENTLQALT GVSLGEGSGA TMSDDEDEFQ MDFCLDQSSG GGGDDMMGFG  180
PLLPTESERS LMERVRQELK IELKQGFKSR IEDVREEILR KRRAGKLPGD TTSVLKNWWQ  240
QHAKWPYPTE DDKAKLVEET GLQLKQINNW FINQRKRNWH SNSQSVTSLK SKRKRM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1x2n_A3e-13221277864Homeobox protein PKNOX1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1274294RKRNWHSNSQSVTSLKSKRKR
Functional Description ? help Back to Top
Source Description
UniProtPossible developmental regulator.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By wounding; up to 7-fold increase.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007158449.11e-150hypothetical protein PHAVU_002G153300g
SwissprotP466061e-131HD1_BRANA; Homeobox protein HD1
TrEMBLV7CM511e-149V7CM51_PHAVU; Uncharacterized protein
STRINGXP_007158449.11e-150(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62990.11e-124KNOTTED-like homeobox of Arabidopsis thaliana 7
Publications ? help Back to Top
  1. Boivin R,Hamel F,Beauseigle D,Bellemare G
    Stage-specific transcription of the homebox gene Bnhd1 in young tissues and flowers of Brassica napus.
    Biochim. Biophys. Acta, 1994. 1219(1): p. 201-4
    [PMID:7916213]