PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy012042

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GRF

Protein Properties

Length: 407aa MW: 44400.7 Da PI: 7.6405

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59551729	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.3e-23	188	231	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 daep rCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e Ahy012042 188 DAEPNRCRRTDGKKWRCSREVAPNHKYCERHMHRGRTRSRKPVE 231 79***************************************987 PP
2	QLQ	52.9	1.1e-18	124	155	2	33
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 +FT aQ+ +L++Q+++yKy++a+ PvPpeLl+ Ahy012042 124 PFTSAQWRELERQAMIYKYMMASIPVPPELLL 155 8*****************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00951	9.7E-10	123	160	IPR014978	Glutamine-Leucine-Glutamine, QLQ
Pfam	PF08880	2.2E-13	124	155	IPR014978	Glutamine-Leucine-Glutamine, QLQ
PROSITE profile	PS51666	19.918	124	159	IPR014978	Glutamine-Leucine-Glutamine, QLQ
PROSITE profile	PS51667	24.635	188	232	IPR014977	WRC domain
Pfam	PF08879	8.0E-20	189	231	IPR014977	WRC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence Send to blast
HNHHHHPFDS DSSASALGDD GDGDGPTLQH HLLTTNHNHS INNAAAANSG VNTVVVDDDD 60 DGAAASVEET RQPLQQPFHF SHSPYYSPSS ATTTTTTTTT TTRYPFKSPG TSGGMMAASL 120 GRFPFTSAQW RELERQAMIY KYMMASIPVP PELLLMPIAA ASRSSPLEGG GGGGGGFNLR 180 LSSSNNNDAE PNRCRRTDGK KWRCSREVAP NHKYCERHMH RGRTRSRKPV ELHNNNNNGH 240 NLLKRARHDS HPYAASSAAV TVAFSNHSTR KDPSSPHFLA SATTNHHSYL ESASSLSLHN 300 FGAGSVPSSR EPRGLDWMLN GDPISLGTSD SEWNTLMNNN KVGFNAMSSC SNTEPQYMNS 360 FPVYSPGLDQ QHNKRSPTFL NPVLVPMETL QSDKPRVFID AWSNAAT

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence Send to blast

HNHHHHPFDS DSSASALGDD GDGDGPTLQH HLLTTNHNHS INNAAAANSG VNTVVVDDDD  60
DGAAASVEET RQPLQQPFHF SHSPYYSPSS ATTTTTTTTT TTRYPFKSPG TSGGMMAASL  120
GRFPFTSAQW RELERQAMIY KYMMASIPVP PELLLMPIAA ASRSSPLEGG GGGGGGFNLR  180
LSSSNNNDAE PNRCRRTDGK KWRCSREVAP NHKYCERHMH RGRTRSRKPV ELHNNNNNGH  240
NLLKRARHDS HPYAASSAAV TVAFSNHSTR KDPSSPHFLA SATTNHHSYL ESASSLSLHN  300
FGAGSVPSSR EPRGLDWMLN GDPISLGTSD SEWNTLMNNN KVGFNAMSSC SNTEPQYMNS  360
FPVYSPGLDQ QHNKRSPTFL NPVLVPMETL QSDKPRVFID AWSNAAT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016181626.1	0.0	growth-regulating factor 1
Refseq	XP_025682105.1	0.0	growth-regulating factor 1
TrEMBL	A0A444X449	0.0	A0A444X449_ARAHY; Uncharacterized protein
STRING	XP_007136458.1	1e-118	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	7e-35	growth-regulating factor 7