PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011728
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 218aa    MW: 23746.7 Da    PI: 7.7567
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54187313PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3452e-14100186192
                EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                f  vl++s+v +s+++  p k + ++    ++       t+    g+sW++ ++    +gr ++ +GW++Fvkan L egD +vF+l+ +s+++ 
  Ahy011728 100 FHVVLSKSHVRRSCLMG-PSKDLVDIlpfAEV------PTVLKCGGESWDMVYR-GHAPGRKFFDGGWRKFVKANCLVEGDACVFELMANSDEKI 186
                56677788888888444.77777677554222......3677889********3.45566799************************98877754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.106.6E-1795194IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.04E-1695190IPR015300DNA-binding pseudobarrel domain
CDDcd100172.88E-1698178No hitNo description
PROSITE profilePS5086311.39299196IPR003340B3 DNA binding domain
SMARTSM010193.8E-8100196IPR003340B3 DNA binding domain
PfamPF023628.1E-13100187IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
XGRETRCAAC DCLKHEKPVI VFSSTGSTXD VVGGGFRKFW RVLPVDNVTP LPTASSMSSP  60
GSSSTSRVSV EEQAPLPKPA DPAAKLSSDE IAPLSGNPFF HVVLSKSHVR RSCLMGPSKD  120
LVDILPFAEV PTVLKCGGES WDMVYRGHAP GRKFFDGGWR KFVKANCLVE GDACVFELMA  180
NSDEKIVSEV QILRGDVPKV FFKRDRIGES EQKPIVID
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015949889.11e-113B3 domain-containing protein Os04g0386900
RefseqXP_029148196.11e-113B3 domain-containing protein Os04g0386900
TrEMBLA0A445ECH21e-112A0A445ECH2_ARAHY; Uncharacterized protein
TrEMBLA0A445ED731e-111A0A445ED73_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-10related to vernalization1 1