PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy011279

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 352aa MW: 38655.7 Da PI: 7.4541

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59552429	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	217	268	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek isle+l++yFs+++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ Ahy011279 217 AEKMISLEVLQRYFSGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 268 5899**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.439	207	288	IPR003035	RWP-RK domain
Pfam	PF02042	1.8E-26	221	268	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence Send to blast
VIDAHTWGFH DACAEHHLQQ GQGVAGRAFL SHNMSFCGNI TQFCKTDYPL VHYALMFGLT 60 SCFAICLQSS HTGSDDYVLE FFLPPSITNF YEQKDLLGSI LATMKQNFQS LKVAAGVELE 120 EGCTIEVVEP INERIHLSLE SVPVAQSAKS PQPTLNASLN KDDGVPQGPL EQQMPAWLDD 180 INDGGNLGDN AGGSTNLMTS LEAKIKKKPS ERKRGKAEKM ISLEVLQRYF SGSLKDAAKS 240 LGVCPTTMKR ICRQHGISRW PSRKINKVNR SLSKLKCVIE SVQGAEGAFA LNSVNKDPLP 300 IAAGSFTEPC TSKMFNRNAS LSIQPSKTQI NENDLDTSRV SETNRQVRMQ DX

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence Send to blast

VIDAHTWGFH DACAEHHLQQ GQGVAGRAFL SHNMSFCGNI TQFCKTDYPL VHYALMFGLT  60
SCFAICLQSS HTGSDDYVLE FFLPPSITNF YEQKDLLGSI LATMKQNFQS LKVAAGVELE  120
EGCTIEVVEP INERIHLSLE SVPVAQSAKS PQPTLNASLN KDDGVPQGPL EQQMPAWLDD  180
INDGGNLGDN AGGSTNLMTS LEAKIKKKPS ERKRGKAEKM ISLEVLQRYF SGSLKDAAKS  240
LGVCPTTMKR ICRQHGISRW PSRKINKVNR SLSKLKCVIE SVQGAEGAFA LNSVNKDPLP  300
IAAGSFTEPC TSKMFNRNAS LSIQPSKTQI NENDLDTSRV SETNRQVRMQ DX

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020958895.1	0.0	protein NLP7 isoform X2
Refseq	XP_025656860.1	0.0	protein NLP7 isoform X2
Swissprot	Q8RWY4	1e-109	NLP6_ARATH; Protein NLP6
TrEMBL	A0A444YXI9	0.0	A0A444YXI9_ARAHY; Uncharacterized protein
STRING	GLYMA09G25230.2	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-109	Nin-like family protein

Publications ? help Back to Top
Liseron-Monfils C, et al. Nitrogen transporter and assimilation genes exhibit developmental stage-selective expression in maize (Zea mays L.) associated with distinct cis-acting promoter motifs. Plant Signal Behav, 2014. [PMID:24270626] Guan P, et al. Interacting TCP and NLP transcription factors control plant responses to nitrate availability. Proc. Natl. Acad. Sci. U.S.A., 2017. 114(9): p. 2419-2424 [PMID:28202720] Guan P Dancing with Hormones: A Current Perspective of Nitrate Signaling and Regulation in Arabidopsis. Front Plant Sci, 2017. 8: p. 1697 [PMID:29033968]