PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy010910

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 377aa MW: 43733.1 Da PI: 9.5463

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58461356	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82	5.8e-26	249	298	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+l++l kyF+ pi +A++ L+v+lTvLKr+CR++GI+RWPhRkiksl Ahy010910 249 AKITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSL 298 78**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	19.531	233	318	IPR003035	RWP-RK domain
Pfam	PF02042	1.1E-21	250	298	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence Send to blast
MTKQHRQEDH APANKLQNLV FCLVVSPFYH HNDTVPASYP NSDGSIFNLA MKNTLLTTLL 60 VFKNTIREEL IRSVHVYQIK DGKVREVERE FVFSESGSYG EMRSTPILRL QKKLCVAEVS 120 EGYQNGVWLC IFSFHRNHKP QFSSIPNLLL LSRNLKLWTI PTLLRDLRVI YKLEKDKDVL 180 SDSTGEERQG NNKDSQPLRK VVPVLTQDLN FLPYEDDMSE SPDNKLDVQA LPDADSAEKK 240 KRASSDRVAK ITLSELVKYF DIPIVEASRR LNVGLTVLKR KCREFGIPRW PHRKIKSLDS 300 LIHEIQEEAN NQESDDKAAA LAAIEKRRML ESEKENIERK PFMDIQSETK KLRQDIFKRR 360 HRARAQVKLI DCLQQQQ

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence Send to blast

MTKQHRQEDH APANKLQNLV FCLVVSPFYH HNDTVPASYP NSDGSIFNLA MKNTLLTTLL  60
VFKNTIREEL IRSVHVYQIK DGKVREVERE FVFSESGSYG EMRSTPILRL QKKLCVAEVS  120
EGYQNGVWLC IFSFHRNHKP QFSSIPNLLL LSRNLKLWTI PTLLRDLRVI YKLEKDKDVL  180
SDSTGEERQG NNKDSQPLRK VVPVLTQDLN FLPYEDDMSE SPDNKLDVQA LPDADSAEKK  240
KRASSDRVAK ITLSELVKYF DIPIVEASRR LNVGLTVLKR KCREFGIPRW PHRKIKSLDS  300
LIHEIQEEAN NQESDDKAAA LAAIEKRRML ESEKENIERK PFMDIQSETK KLRQDIFKRR  360
HRARAQVKLI DCLQQQQ

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025695789.1	0.0	protein RKD5 isoform X1
Swissprot	O81791	1e-80	RKD5_ARATH; Protein RKD5
TrEMBL	A0A444WWD1	0.0	A0A444WWD1_ARAHY; Uncharacterized protein
TrEMBL	A0A444WWK2	0.0	A0A444WWK2_ARAHY; Uncharacterized protein
TrEMBL	A0A445EU59	0.0	A0A445EU59_ARAHY; Uncharacterized protein
STRING	GLYMA01G36360.1	1e-150	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	3e-70	RWP-RK domain-containing protein

Publications ? help Back to Top
Tedeschi F,Rizzo P,Rutten T,Altschmied L,Bäumlein H RWP-RK domain-containing transcription factors control cell differentiation during female gametophyte development in Arabidopsis. New Phytol., 2017. 213(4): p. 1909-1924 [PMID:27870062]