PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy010492

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

ERF

Protein Properties

Length: 254aa MW: 28121.9 Da PI: 9.3544

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S54109500	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.6	6.4e-18	122	168	6	55
AP2 6 VrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 Vr+++ +g+++AeIrdp+++g r++lg+f+ta +Aaka+++a+ kl+g Ahy010492 122 VRQRP-WGKYAAEIRDPNKRG--SRVWLGTFDTAIDAAKAYDRAAFKLRG 168 9**.******96655..***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	21.549	118	176	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.6E-10	119	130	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	7.85E-20	122	177	IPR016177	DNA-binding domain
Gene3D	G3DSA:3.30.730.10	5.4E-29	122	177	IPR001471	AP2/ERF domain
CDD	cd00018	6.74E-28	122	176	No hit	No description
SMART	SM00380	6.1E-32	122	182	IPR001471	AP2/ERF domain
Pfam	PF00847	3.3E-11	122	168	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.6E-10	158	178	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence Send to blast
MANPAELSAL NQIKIHLLGE LSPLPHNSSF SFQFYQTNPT TSSSSSSSSS SSASVNQYFN 60 CNEVVNNLET PRSKPHSSAS SSNRKPSLQI SLPKKTEWIQ FGEEKEISKS SEQQKKNTIE 120 XVRQRPWGKY AAEIRDPNKR GSRVWLGTFD TAIDAAKAYD RAAFKLRGSK AILNFPLEAG 180 ADDRKRPRQE EEVEEKPVVK KEKMEESSDV XGVRDIPLTP SSWTGFWDAD VTGIFSVPPV 240 IAVISPPGVR ISTA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1gcc_A	2e-26	122	177	6	61	ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269\|PubMed:10715325, ECO:0000269\|PubMed:9756931}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2). Wounding as well as cold stress induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by jasmonate, Alternaria brassicicola, exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269\|PubMed:10715325}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015963627.1	1e-143	ethylene-responsive transcription factor 5
Swissprot	O80341	3e-54	EF102_ARATH; Ethylene-responsive transcription factor 5
TrEMBL	A0A444WUK7	1e-135	A0A444WUK7_ARAHY; Uncharacterized protein
STRING	GLYMA11G03900.1	7e-82	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47230.1	3e-32	ethylene responsive element binding factor 5

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]