PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010491
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 252aa    MW: 28500.7 Da    PI: 6.5716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54169763PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.51.4e-14165211354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  Ahy010491 165 KSHSEAERRRRERINNHLSKLRSLLPST-----TKTDKASLLAEVIQHVKEL 211
                79*************************9.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.003162211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-12165211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-15166221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-15166221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-13168217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.85E-6175214No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MKQEINHNQH QGECSYSPSS YNMMHQHNMM MMSDEMIFGG GRGFINSNNM NMMNMNMNML  60
SSSDQMMHQQ PQPQQQQPWS MPSIQELPFN NHESFIVPPQ QQQQASPYAS FFNSRRVHPS  120
SSSSMQFAAA YHHHEGATSS FDPQAELSKM TAQEIMEAKA LAASKSHSEA ERRRRERINN  180
HLSKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSMIAE TSSVPTESDE LTVDDASDED  240
GKLVIKASLC CX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170175ERRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025621430.10.0transcription factor bHLH30-like
RefseqXP_025621431.10.0transcription factor bHLH30-like
RefseqXP_025621432.10.0transcription factor bHLH30-like
RefseqXP_025621433.10.0transcription factor bHLH30-like
SwissprotQ9S7Y15e-53BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A445BCJ80.0A0A445BCJ8_ARAHY; Uncharacterized protein
STRINGXP_004297146.17e-68(Fragaria vesca)
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ohashi-Ito K, et al.
    A bHLH complex activates vascular cell division via cytokinin action in root apical meristem.
    Curr. Biol., 2014. 24(17): p. 2053-8
    [PMID:25131670]
  3. Katayama H, et al.
    A Negative Feedback Loop Controlling bHLH Complexes Is Involved in Vascular Cell Division and Differentiation in the Root Apical Meristem.
    Curr. Biol., 2015. 25(23): p. 3144-50
    [PMID:26616019]