PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy010476

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

TALE

Protein Properties

Length: 633aa MW: 70052.5 Da PI: 6.4014

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59545825	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-12553	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	383	420	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + Ahy010476 383 FEHflHPYPKDSEKIMLARQTGLTRNQVANWFINARVR 420 665559******************************88 PP
2	BELL	124.4	4.4e-40	254	325	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rq+l kk+kLl +l+eVdkrY+qy++q+q+v+ssF++vag+g+a+pYt+lAl++iSrhFrcL+dai++qi Ahy010476 254 DRQNLLDKKTKLLAMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQI 325 5788999****************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	2.1E-58	172	323	IPR006563	POX domain
Pfam	PF07526	1.1E-50	180	322	IPR006563	POX domain
PROSITE profile	PS50071	12.438	361	424	IPR001356	Homeobox domain
SMART	SM00389	1.6E-9	364	428	IPR001356	Homeobox domain
CDD	cd00086	1.45E-12	364	425	No hit	No description
SuperFamily	SSF46689	2.27E-17	365	431	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.6E-28	367	430	IPR009057	Homeodomain-like
Pfam	PF05920	3.0E-17	381	420	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence Send to blast
MLSGNSLLTH HNYGDSVGGG GHNNELKFIT SLGESMTMQP LEEHSNAAAT GDPSCNSFGD 60 QNIQCQGLSL SLGSVMPSIA TSMPHHFQYP QYHNSSFTSL MNAMPNLKGN NGSSLKDDEV 120 RNTECMTPPM SSGGFYNSIK REGLYNNTNH PSMCLSEGQV DPGLHGSAGG SAGFSSSTAL 180 NSQYLKAAQE LLDEIVNVRK ALKQPGLEKQ QSFRDAGLDG SKDSDGKSNS QSMQVSSGAN 240 GSAVNSSTEL SPADRQNLLD KKTKLLAMLD EVDKRYRQYC HQMQIVVSSF DMVAGCGAAE 300 PYTALALRTI SRHFRCLRDA ISGQIQVTQR SLGEQEGIPR LRYVDQQLRQ QKALQQLGVM 360 RQAWRPQRGL PESSVSILRA WLFEHFLHPY PKDSEKIMLA RQTGLTRNQV ANWFINARVR 420 LWKPMVEEMY KEEFGDSEMS CNLLSENTIP KASRDDVQVS DNNKREESQE NLAAVDDSVQ 480 HGIQSSDYGE NLMDSSSSRT SRKLQQCDQR FNMKNTPFSN ASTIQINHHN GHDDGNGCLA 540 STHATYDYSA LGNFAAVGGH VSLALELRNR ESNGLGMSND DEIHNKRSSN QTLASSSEND 600 LLDYHLTEQE KQQQQQQHKF GNPQQRLLHE FVV

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence Send to blast

MLSGNSLLTH HNYGDSVGGG GHNNELKFIT SLGESMTMQP LEEHSNAAAT GDPSCNSFGD  60
QNIQCQGLSL SLGSVMPSIA TSMPHHFQYP QYHNSSFTSL MNAMPNLKGN NGSSLKDDEV  120
RNTECMTPPM SSGGFYNSIK REGLYNNTNH PSMCLSEGQV DPGLHGSAGG SAGFSSSTAL  180
NSQYLKAAQE LLDEIVNVRK ALKQPGLEKQ QSFRDAGLDG SKDSDGKSNS QSMQVSSGAN  240
GSAVNSSTEL SPADRQNLLD KKTKLLAMLD EVDKRYRQYC HQMQIVVSSF DMVAGCGAAE  300
PYTALALRTI SRHFRCLRDA ISGQIQVTQR SLGEQEGIPR LRYVDQQLRQ QKALQQLGVM  360
RQAWRPQRGL PESSVSILRA WLFEHFLHPY PKDSEKIMLA RQTGLTRNQV ANWFINARVR  420
LWKPMVEEMY KEEFGDSEMS CNLLSENTIP KASRDDVQVS DNNKREESQE NLAAVDDSVQ  480
HGIQSSDYGE NLMDSSSSRT SRKLQQCDQR FNMKNTPFSN ASTIQINHHN GHDDGNGCLA  540
STHATYDYSA LGNFAAVGGH VSLALELRNR ESNGLGMSND DEIHNKRSSN QTLASSSEND  600
LLDYHLTEQE KQQQQQQHKF GNPQQRLLHE FVV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4xrs_A	2e-16	370	427	1	58	Homeobox protein Meis1
4xrs_B	2e-16	370	427	1	58	Homeobox protein Meis1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269\|PubMed:16513846}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016204753.1	0.0	BEL1-like homeodomain protein 7 isoform X1
Refseq	XP_016204754.1	0.0	BEL1-like homeodomain protein 7 isoform X1
Refseq	XP_016204755.1	0.0	BEL1-like homeodomain protein 7 isoform X1
Refseq	XP_025657750.1	0.0	BEL1-like homeodomain protein 7
Swissprot	Q9FWS9	1e-111	BLH3_ARATH; BEL1-like homeodomain protein 3
TrEMBL	A0A445CK32	0.0	A0A445CK32_ARAHY; Uncharacterized protein
STRING	XP_007160715.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-103	BEL1-like homeodomain 7

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]