PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010227
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 209aa    MW: 23766.5 Da    PI: 9.7701
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59519918PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding543.9e-1774119147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+ +v q+G+ +W++Ia+++  gR++k+c++rw++ 
        Ahy010227  74 RGHWRPAEDAQLKALVSQYGPQNWNLIAEHLK-GRSGKSCRLRWFNQ 119
                      899****************************9.***********996 PP
2Myb_DNA-binding51.81.8e-16128169346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++ +eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ 
        Ahy010227 128 AFCEEEEERLLTAHRMYGNK-WAMIARLFP-GRTDNAVKNHWHV 169
                      5669****************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.76369120IPR017930Myb domain
SMARTSM007172.1E-1473122IPR001005SANT/Myb domain
PfamPF002493.3E-1674119IPR001005SANT/Myb domain
SuperFamilySSF466892.96E-2874167IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-2575127IPR009057Homeodomain-like
CDDcd001672.56E-1277118No hitNo description
PROSITE profilePS5129425.475121175IPR017930Myb domain
SMARTSM007171.5E-12125173IPR001005SANT/Myb domain
PfamPF002492.7E-13128168IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-19128174IPR009057Homeodomain-like
CDDcd001678.86E-10131168No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
XDPELIMMGL QILSSSKWKM GTNNNSENKS LSLKIGDEED EIDGGEEREE GNSKGPCSSS  60
SNGGKIGHVK LCARGHWRPA EDAQLKALVS QYGPQNWNLI AEHLKGRSGK SCRLRWFNQL  120
DPRINRRAFC EEEEERLLTA HRMYGNKWAM IARLFPGRTD NAVKNHWHVI MARKQREQSS  180
MYRRRKPPPV FSPPSVEEGV VLLPPPKAX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A6e-34721745107B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor required for sugar partitioning from leaves to anthers during male reproductive development. Required for the production of functional pollen grains. Binds to the promoter of the anther-specific sugar transporter MST8 and regulates its expression. Regulates the expression of genes involved in sugar partitioning in flower, such as the sugar transporter SUT3, the invertase INV4, the UDP-glucose pyrophosphorylase UGP2 and the starch synthase WAXY. {ECO:0000269|PubMed:20305120}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:20305120}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016161900.11e-152transcription factor MYB56 isoform X1
RefseqXP_025658266.11e-152transcription factor MYB54 isoform X1
SwissprotQ5NBM86e-72CSA_ORYSJ; Transcription factor CSA
TrEMBLA0A445CS461e-134A0A445CS46_ARAHY; Uncharacterized protein
STRINGevm.model.supercontig_73.45e-81(Carica papaya)
STRINGcassava4.1_024606m3e-80(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.13e-71myb domain protein 105
Publications ? help Back to Top
  1. Leonard LM,Follette VM
    Sexual functioning in women reporting a history of child sexual abuse: review of the empirical literature and clinical implications.
    Annu Rev Sex Res, 2002. 13: p. 346-88
    [PMID:12836736]
  2. Wang L,Li X,Chen Z
    Sulfated modification of the polysaccharides obtained from defatted rice bran and their antitumor activities.
    Int. J. Biol. Macromol., 2009. 44(2): p. 211-4
    [PMID:19135473]
  3. Wang L,Huang H,Wei Y,Li X,Chen Z
    Characterization and anti-tumor activities of sulfated polysaccharide SRBPS2a obtained from defatted rice bran.
    Int. J. Biol. Macromol., 2009. 45(4): p. 427-31
    [PMID:19549538]
  4. Zhang H, et al.
    Carbon starved anther encodes a MYB domain protein that regulates sugar partitioning required for rice pollen development.
    Plant Cell, 2010. 22(3): p. 672-89
    [PMID:20305120]
  5. Zhang H, et al.
    Mutation in CSA creates a new photoperiod-sensitive genic male sterile line applicable for hybrid rice seed production.
    Proc. Natl. Acad. Sci. U.S.A., 2013. 110(1): p. 76-81
    [PMID:23256151]
  6. Zhu X, et al.
    Brassinosteroids promote development of rice pollen grains and seeds by triggering expression of Carbon Starved Anther, a MYB domain protein.
    Plant J., 2015. 82(4): p. 570-81
    [PMID:25754973]
  7. Li X, et al.
    Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress.
    Plant Cell Environ., 2015. 38(10): p. 2171-92
    [PMID:25828772]
  8. Shaar-Moshe L,Hübner S,Peleg Z
    Identification of conserved drought-adaptive genes using a cross-species meta-analysis approach.
    BMC Plant Biol., 2015. 15: p. 111
    [PMID:25935420]