PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy009514
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 271aa    MW: 29949.3 Da    PI: 8.858
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58450995PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.92.5e-17201235135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  Ahy009514 201 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 235
                *******************************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.4E-15195249IPR000679Zinc finger, GATA-type
SuperFamilySSF577167.13E-15196259No hitNo description
Gene3DG3DSA:3.30.50.101.2E-13199233IPR013088Zinc finger, NHR/GATA-type
PROSITE profilePS5011411.108199231IPR000679Zinc finger, GATA-type
CDDcd002025.18E-11200247No hitNo description
PfamPF003205.1E-15201235IPR000679Zinc finger, GATA-type
PROSITE patternPS003440201226IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MSXEVDVGLE WLSVFVEECF SNPPSYILGP SKSVEAITTT TITTCSSNKN PSSTALLKQN  60
NNNDSSLQNF SVPSKARSKR KRLSAVTNRR RTKTPFSIWS HQNDEPLISD PPLLKQTYWL  120
ADSELFVLPK RQKKDSGKDV IAKDGDDDDK DGGGEKGAVV MKRGSLVSLE ECSEAEEDGD  180
GGNNNNNNNN NNGENPMPRR CTHCLAQRTP QWRAGPLGPK TLCNACGVRY KSGRLLPEYR  240
PAKSPTFVSY LHSNSHKKVM EMRMAGSVLH S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17890KRKRLSAVTNRRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016162144.10.0GATA transcription factor 2
RefseqXP_025658482.10.0GATA transcription factor 2
TrEMBLA0A444YRJ50.0A0A444YRJ5_ARAHY; Uncharacterized protein
STRINGXP_007161927.18e-94(Phaseolus vulgaris)