PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy009514 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | GATA | ||||||||
Protein Properties | Length: 271aa MW: 29949.3 Da PI: 8.858 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53.9 | 2.5e-17 | 201 | 235 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + Tp+WR gp g+ktLCnaCG++y++ +l Ahy009514 201 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 235 *******************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00401 | 6.4E-15 | 195 | 249 | IPR000679 | Zinc finger, GATA-type |
SuperFamily | SSF57716 | 7.13E-15 | 196 | 259 | No hit | No description |
Gene3D | G3DSA:3.30.50.10 | 1.2E-13 | 199 | 233 | IPR013088 | Zinc finger, NHR/GATA-type |
PROSITE profile | PS50114 | 11.108 | 199 | 231 | IPR000679 | Zinc finger, GATA-type |
CDD | cd00202 | 5.18E-11 | 200 | 247 | No hit | No description |
Pfam | PF00320 | 5.1E-15 | 201 | 235 | IPR000679 | Zinc finger, GATA-type |
PROSITE pattern | PS00344 | 0 | 201 | 226 | IPR000679 | Zinc finger, GATA-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence Send to blast |
MSXEVDVGLE WLSVFVEECF SNPPSYILGP SKSVEAITTT TITTCSSNKN PSSTALLKQN 60 NNNDSSLQNF SVPSKARSKR KRLSAVTNRR RTKTPFSIWS HQNDEPLISD PPLLKQTYWL 120 ADSELFVLPK RQKKDSGKDV IAKDGDDDDK DGGGEKGAVV MKRGSLVSLE ECSEAEEDGD 180 GGNNNNNNNN NNGENPMPRR CTHCLAQRTP QWRAGPLGPK TLCNACGVRY KSGRLLPEYR 240 PAKSPTFVSY LHSNSHKKVM EMRMAGSVLH S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 78 | 90 | KRKRLSAVTNRRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016162144.1 | 0.0 | GATA transcription factor 2 | ||||
Refseq | XP_025658482.1 | 0.0 | GATA transcription factor 2 | ||||
TrEMBL | A0A444YRJ5 | 0.0 | A0A444YRJ5_ARAHY; Uncharacterized protein | ||||
STRING | XP_007161927.1 | 8e-94 | (Phaseolus vulgaris) |