PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy009453

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 453aa MW: 52497.4 Da PI: 4.6428

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59514500	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.9	1.1e-12	31	96	2	70
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+++ev aL+++r+ m+++ + + W++vs+k+ e gf++s +Ckek+e+ +++ + +++++ Ahy009453 31 WSNDEVVALLRIRSTMDTTWFPQ---LTYWDHVSRKLGELGFKKSGDKCKEKFEDETRYFNNYAKNNSY 96 ***************998776...89******************************999988865 PP
2	trihelix	47.5	4.8e-15	392	452	1	54
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekw 54 rW+++evlaLi++r + eer + ++ k plWe++s+ m++ g++rs+k+Ckekw Ahy009453 392 RWPRDEVLALINLRCesikmnnNAEERESGNNNKIPLWERISQGMSDLGYKRSAKRCKEKW 452 8***********977744333333333357999************************ PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.017	23	84	IPR017877	Myb-like domain
Pfam	PF13837	1.3E-8	30	94	No hit	No description
PROSITE profile	PS50090	6.377	385	453	IPR017877	Myb-like domain
Pfam	PF13837	4.8E-10	391	452	No hit	No description
CDD	cd12203	2.14E-16	391	452	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence Send to blast
VLNNNNLFHT SATDERVQTQ VLPNDLIDSS WSNDEVVALL RIRSTMDTTW FPQLTYWDHV 60 SRKLGELGFK KSGDKCKEKF EDETRYFNNY AKNNSYRFLN ELEEFYQGDN HNENPMVDNQ 120 DHVVTEKTQE FEHPMNAGGG DIEEEEEEEE DNAGGGDIEE VEEEEEEEEE EEESSRDGKS 180 VKEQCEEDNE SEKKMKMKRK RKRRCRFEML KGFCESIVNN MMAQQEEIHN KLIEDMLRRD 240 EEKLQREEAW KKQETERMNK ELQIMAQEQA IAGDRQASII EFLKKYAATQ TLTTNPNNDE 300 PTPSSSKLII PSSHQIQNSS GLCSIPPLSA ENPSSMSDTL LQQVHSSSTH SSPASHNNTT 360 SSSSLNRHDN YHSNLLVKPL VTDQKENNVG RRWPRDEVLA LINLRCESIK MNNNAEERES 420 GNNNKIPLWE RISQGMSDLG YKRSAKRCKE KWX

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence Send to blast

VLNNNNLFHT SATDERVQTQ VLPNDLIDSS WSNDEVVALL RIRSTMDTTW FPQLTYWDHV  60
SRKLGELGFK KSGDKCKEKF EDETRYFNNY AKNNSYRFLN ELEEFYQGDN HNENPMVDNQ  120
DHVVTEKTQE FEHPMNAGGG DIEEEEEEEE DNAGGGDIEE VEEEEEEEEE EEESSRDGKS  180
VKEQCEEDNE SEKKMKMKRK RKRRCRFEML KGFCESIVNN MMAQQEEIHN KLIEDMLRRD  240
EEKLQREEAW KKQETERMNK ELQIMAQEQA IAGDRQASII EFLKKYAATQ TLTTNPNNDE  300
PTPSSSKLII PSSHQIQNSS GLCSIPPLSA ENPSSMSDTL LQQVHSSSTH SSPASHNNTT  360
SSSSLNRHDN YHSNLLVKPL VTDQKENNVG RRWPRDEVLA LINLRCESIK MNNNAEERES  420
GNNNKIPLWE RISQGMSDLG YKRSAKRCKE KWX

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	202	KKMKMKRKRKR
2	197	203	KRKRKRR
3	198	203	RKRKRR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016205443.1	0.0	trihelix transcription factor GTL2
Refseq	XP_025662654.1	0.0	trihelix transcription factor GTL2
TrEMBL	A0A444YKE8	0.0	A0A444YKE8_ARAHY; Uncharacterized protein
STRING	GLYMA19G43280.1	1e-111	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	6e-51	Trihelix family protein