PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy009270

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 337aa MW: 37951.7 Da PI: 4.4334

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58451215	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-3430893	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7.3e-12	170	213	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L Ahy009270 170 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 213 589*******************66......**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.491	164	213	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	3.66E-15	166	226	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.3E-12	170	219	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.3E-9	170	213	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.6E-15	171	226	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.78E-5	171	217	No hit	No description
CDD	cd04873	0.00134	263	304	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
MELSQLGFLE ELMLAPRKDT WSSCTSNDVF SPSSWNYFDP FLDTPSSSSF PPSAFSPPPP 60 DCPFTTSYPF PDDAFTMPDL DSSYTTKYEY EYDDAPPPPL PHNHQDLDDD NNNPSVLDDE 120 DAGFLGCKVE EQAVVDVQVH VPVVFNMGMC GIGEKKNKSK KLEGQPSKNL MAERRRRKRL 180 NDRLSMLRSI VPKISKMDRT SILGDTIDYM KELLERINKL QEEEVEEGTS QQNLLGVSKE 240 LKPNEAMVRN SPKFDVERRD KDTRISICCA TKPGLLLSTV NTLEALGLEI QQCVISSFND 300 FSMQASCSEV SEQRNCVDPE EIKQALFRNA GYGGRCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	179	ERRRRKRL

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269\|PubMed:17088607}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015956676.1	0.0	transcription factor bHLH61
Refseq	XP_025690423.1	0.0	transcription factor bHLH61
Swissprot	Q9LSL1	2e-90	BH093_ARATH; Transcription factor bHLH93
TrEMBL	A0A445DQ40	0.0	A0A445DQ40_ARAHY; Uncharacterized protein
STRING	GLYMA01G02390.1	1e-143	(Glycine max)

Publications ? help Back to Top
Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Sharma N, et al. NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis. Development, 2016. 143(4): p. 682-90 [PMID:26758694] Chen YS, et al. Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis. Plant Mol. Biol., 2017. 93(3): p. 299-311 [PMID:27866313] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]