PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy009161

Common Name

MYB21

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB_related

Protein Properties

Length: 295aa MW: 32319.7 Da PI: 9.7707

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58463594	PU_ref	Unigene	View CDS
gnl\|UG\|Ahy#S58470861	PU_unref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-24473	PU_unref	plantGDB	View CDS
PUT-171a-Arachis_hypogaea-24474	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.8	2.4e-13	5	56	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++WT++E++ l+ +v+++G+g Wk I + + + R+ ++k++w+++ Ahy009161 5 KQKWTQDEEDALIAGVEKHGPGKWKNILKNPQfapflTSRSNIDLKDKWRNL 56 79************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.827	1	61	IPR017930	Myb domain
SuperFamily	SSF46689	6.9E-16	2	59	IPR009057	Homeodomain-like
SMART	SM00717	5.6E-9	4	59	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	5.2E-15	4	56	IPR009057	Homeodomain-like
Pfam	PF00249	4.6E-10	5	56	IPR001005	SANT/Myb domain
CDD	cd11660	3.40E-20	6	56	No hit	No description
SMART	SM00526	1.6E-17	127	192	IPR005818	Linker histone H1/H5, domain H15
Gene3D	G3DSA:1.10.10.10	2.0E-16	128	204	IPR011991	Winged helix-turn-helix DNA-binding domain
SuperFamily	SSF46785	4.35E-17	128	206	IPR011991	Winged helix-turn-helix DNA-binding domain
PROSITE profile	PS51504	27.057	129	197	IPR005818	Linker histone H1/H5, domain H15
CDD	cd00073	1.58E-11	130	189	No hit	No description
Pfam	PF00538	1.0E-12	131	190	IPR005818	Linker histone H1/H5, domain H15

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006334	Biological Process	nucleosome assembly
GO:0000786	Cellular Component	nucleosome
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MGNQKQKWTQ DEEDALIAGV EKHGPGKWKN ILKNPQFAPF LTSRSNIDLK DKWRNLSVSN 60 GTQGSKEKSR VPRIKAAAPI AATPVAAAAA SNAIVVAGED ATIVTTMIHQ PDPSVAVGDS 120 SQNDEDAKNR PRYNAMVLEA LSTLKDANGS DLNAIVNFIE QKHKVPQNFR RALSTRLRRL 180 VSQGKLEKVQ NCYKIKKDYS PVPKSPVAVK KNVWPQRQQP PPPPEFVASN ETIKEAAETA 240 AYRIAEAESK SYLAAEAVKE AERIARLAED AEAMLQLVQQ IYDACSRGEA VILAS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016176634.1	0.0	telomere repeat-binding factor 4
Refseq	XP_016176635.1	0.0	telomere repeat-binding factor 4
TrEMBL	A0A444XDE7	0.0	A0A444XDE7_ARAHY; Uncharacterized protein
TrEMBL	V5T692	0.0	V5T692_ARAHY; Putative MYB-related protein 21
STRING	XP_007135518.1	1e-135	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72740.2	2e-65	MYB_related family protein

Publications ? help Back to Top
Chen N, et al. Identification of 30 MYB transcription factor genes and analysis of their expression during abiotic stress in peanut (Arachis hypogaea L.). Gene, 2014. 533(1): p. 332-45 [PMID:24013078]