PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy008888

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GRAS

Protein Properties

Length: 693aa MW: 77575.6 Da PI: 6.1132

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59555717	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	369.5	4.5e-113	325	690	3	373
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102 +lL++cA+av+s d++ a+++L+++++++ +gd +qRla+yf+ +L++rla ++ k + +++s ++ l+a+k++ + P+ ++s+++aN++I Ahy008888 325 SLLTQCAQAVASYDQRSANEILKQIRQNSPASGDGLQRLAKYFADGLESRLAA---GTPKYILLQSAS---AADMLKAYKVYITAIPFQRMSNFLANRTI 418 79************************************************9...444444444444...789********************** PP GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200 l+ +++e+ +HiiDf+i +G+QWp+L+q L++Rp+gpp+lRiTg++ p++g +e++eetg+rL+++++++gvpfe+n +a+++e+++le+L+++++E Ahy008888 419 LKLAQNESSLHIIDFGIFYGFQWPCLIQRLSERPGGPPRLRITGIDLPQPGfrPAERVEETGRRLKNYCKRFGVPFEYNC-LAQKWETIQLEDLNIDRNE 517 **********************************************9*************************.6************** PP GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvac 300 +++Vn+ ++l++l de+v+ + +rd+vL+l+++++P+++++ + +n++ Fl+rf eal ++salfd++ea++pr++ +r + E+ l+gr++ nv+ac Ahy008888 518 VTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSALFDMFEATVPRDNPHRLMFEQGLFGRDAINVIAC 617 ************************************************************************************************ PP GRAS 301 egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 egaer+er et+++W+ r ++aGFk++++ + + +k +++k + + + v+e+ +++++gWk+r L ++S W Ahy008888 618 EGAERVERPETYKQWQVRNRRAGFKQLAIAPELLNRVKGMVKKEYHKDFVVDEDGKWVLQGWKGRILHALSPW 690 *****************************************888*********************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	65.634	297	671	IPR005202	Transcription factor GRAS
Pfam	PF03514	1.6E-110	325	690	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence Send to blast
MISADSRTEN YAGFVYENGP MSVFSNSNNH QNPENVFKFE DSSSNHAESP TSDDPDGTNN 60 GESHAESTKH SNPILRYISE ILLDEEDDLQ QKPCMLHDCL KLQAAEKGFY DAIGRSYPSS 120 PSKIYGGFGD DCHDPDDSNF GRTTSSESNS SSYNTSENSC ESDWFNGWGD FESKFLQNSL 180 IESPEMKNSY EVLGLGNSQI RDSHGSVYFQ NGTLHNIIPD MLPSITGGGS GRSREKRSHH 240 VDDGTQEGER GNKLSAVYAD ESEPLEMFDA VLLCQDGKSP AIFCGDRESD SGGSNVKASR 300 SKKGANKGGA TNKGGTISTT VDLWSLLTQC AQAVASYDQR SANEILKQIR QNSPASGDGL 360 QRLAKYFADG LESRLAAGTP KYILLQSASA ADMLKAYKVY ITAIPFQRMS NFLANRTILK 420 LAQNESSLHI IDFGIFYGFQ WPCLIQRLSE RPGGPPRLRI TGIDLPQPGF RPAERVEETG 480 RRLKNYCKRF GVPFEYNCLA QKWETIQLED LNIDRNEVTV VNCLYRLKNL SDETVTANCP 540 RDAVLRLIRR INPNIFIHGV VNGTYNAPFF LTRFREALFH FSALFDMFEA TVPRDNPHRL 600 MFEQGLFGRD AINVIACEGA ERVERPETYK QWQVRNRRAG FKQLAIAPEL LNRVKGMVKK 660 EYHKDFVVDE DGKWVLQGWK GRILHALSPW VPA

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence Send to blast

MISADSRTEN YAGFVYENGP MSVFSNSNNH QNPENVFKFE DSSSNHAESP TSDDPDGTNN  60
GESHAESTKH SNPILRYISE ILLDEEDDLQ QKPCMLHDCL KLQAAEKGFY DAIGRSYPSS  120
PSKIYGGFGD DCHDPDDSNF GRTTSSESNS SSYNTSENSC ESDWFNGWGD FESKFLQNSL  180
IESPEMKNSY EVLGLGNSQI RDSHGSVYFQ NGTLHNIIPD MLPSITGGGS GRSREKRSHH  240
VDDGTQEGER GNKLSAVYAD ESEPLEMFDA VLLCQDGKSP AIFCGDRESD SGGSNVKASR  300
SKKGANKGGA TNKGGTISTT VDLWSLLTQC AQAVASYDQR SANEILKQIR QNSPASGDGL  360
QRLAKYFADG LESRLAAGTP KYILLQSASA ADMLKAYKVY ITAIPFQRMS NFLANRTILK  420
LAQNESSLHI IDFGIFYGFQ WPCLIQRLSE RPGGPPRLRI TGIDLPQPGF RPAERVEETG  480
RRLKNYCKRF GVPFEYNCLA QKWETIQLED LNIDRNEVTV VNCLYRLKNL SDETVTANCP  540
RDAVLRLIRR INPNIFIHGV VNGTYNAPFF LTRFREALFH FSALFDMFEA TVPRDNPHRL  600
MFEQGLFGRD AINVIACEGA ERVERPETYK QWQVRNRRAG FKQLAIAPEL LNRVKGMVKK  660
EYHKDFVVDE DGKWVLQGWK GRILHALSPW VPA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5b3g_A	2e-49	329	692	25	380	Protein SCARECROW
5b3h_A	1e-49	329	692	24	379	Protein SCARECROW
5b3h_D	1e-49	329	692	24	379	Protein SCARECROW
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025686195.1	0.0	scarecrow-like protein 30
TrEMBL	A0A445E456	0.0	A0A445E456_ARAHY; Uncharacterized protein
STRING	GLYMA12G06630.2	0.0	(Glycine max)