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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ahy008448 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | Nin-like | ||||||||
| Protein Properties | Length: 329aa MW: 37984.6 Da PI: 6.7349 | ||||||||
| Description | Nin-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | RWP-RK | 79.8 | 2.8e-25 | 205 | 254 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
++i l dl kyF+ pi +A+++L+++lTvLKr+CR++GI+RWPhRkiksl
Ahy008448 205 AKIALPDLVKYFDVPIVEASRNLNIGLTVLKRKCREFGIPRWPHRKIKSL 254
7899********************************************97 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51519 | 18.963 | 189 | 274 | IPR003035 | RWP-RK domain |
| Pfam | PF02042 | 2.2E-20 | 207 | 254 | IPR003035 | RWP-RK domain |
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 329 aa Download sequence Send to blast |
MDSSLSILLV FNNTIQPELF RSVHVYCREL LDGDEREEEE VVVEREFVLS ESGFYVEMKC 60 TPILTSLKLC VDDVCEGYKN GVWLCVFAFH ADHTPQFTHI PSILLFARNS KLKAIPNLLN 120 DLQIIYKLEL KAEVKDDLLD SSKEESQGNS DGHQSPQKAL PVFNQDLNCL PLDEDTTELI 180 DKKTNVESLP GFGAKKRRAQ SDHIAKIALP DLVKYFDVPI VEASRNLNIG LTVLKRKCRE 240 FGIPRWPHRK IKSLDNLIHD LEEEAKHQEP KDKVAAMAMV RRQRMLECEK ENMEKKPFMD 300 IQTETKRFRQ DVFKRRHRAR AVEKHSSAV |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_025651588.1 | 0.0 | protein RKD5-like | ||||
| Refseq | XP_025698237.1 | 0.0 | protein RKD5-like | ||||
| TrEMBL | A0A444WUW3 | 0.0 | A0A444WUW3_ARAHY; Uncharacterized protein | ||||
| STRING | AES95308 | 1e-158 | (Medicago truncatula) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G35590.1 | 6e-82 | RWP-RK domain-containing protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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