PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy008395 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 272aa MW: 31619.1 Da PI: 6.5725 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.5 | 1.6e-50 | 17 | 145 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 lppGfrF P+deelv++yL kk+++++l +++ e+d++ +ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v + ++e+ Ahy008395 17 LPPGFRFYPSDEELVCHYLYKKITNQQLLK-DTLIEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVQDPlTQEV 115 79*************************777.7899*************88888999*************************************9999999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg++ktLvfy++rap+g kt W+mhe+rle Ahy008395 116 VGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 145 ***************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-61 | 13 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 57.478 | 17 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.7E-28 | 18 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence Send to blast |
XELIYIEMGL RDIGASLPPG FRFYPSDEEL VCHYLYKKIT NQQLLKDTLI EIDLHICEPW 60 QLPEVAKLNA NEWYFFSFRD RKYATGFRTN RATTSGYWKA TGKDRTVQDP LTQEVVGMRK 120 TLVFYRNRAP NGIKTGWIMH EFRLETPHMP PKEDWVLCRV FHKSKEENSG KLIMYDSIST 180 HHESSNSMAL VSTHLLNPIN NHNAMNNFLH HFSSSRDDSQ TNNANNNNNN NSPKGYDGYG 240 FIWDHMDLED HSVPLSDFQV DNNNNNNNIA LL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-48 | 8 | 166 | 1 | 171 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by auxin. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025603229.1 | 0.0 | protein CUP-SHAPED COTYLEDON 3 | ||||
Swissprot | Q84TE6 | 8e-64 | NAC22_ARATH; NAC domain-containing protein 21/22 | ||||
TrEMBL | A0A445CPS7 | 0.0 | A0A445CPS7_ARAHY; Uncharacterized protein | ||||
STRING | XP_007162552.1 | 1e-128 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 2e-92 | NAC domain containing protein 74 |