PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy008077 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 244aa MW: 26933.3 Da PI: 8.1323 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.5 | 0.00044 | 97 | 119 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H Ahy008077 97 FSCNYCRRKFFSSQALGGHQNAH 119 89*****************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 2.15E-6 | 95 | 125 | No hit | No description |
PROSITE profile | PS50157 | 11.302 | 97 | 124 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 99 | 119 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MMTPNLNLEP ENYSEGSSQV ASSASLQETS PELNKESTTA SSCLTNLTKA EGDPGSVTLD 60 LTLNFNASDG ELKGTSDASS EVGPEAFASG SATPRVFSCN YCRRKFFSSQ ALGGHQNAHK 120 RERTMAKRAM RMGMFTERYT SLASLPLHGS PFRSLGIEAH SAMHQRPMPQ LRAPDLRAGA 180 KFERNHFGSP IFMEDEDVGY FGQAVSDRSG SKPVLTWYML KHPILIILPW HLLNQKHQHF 240 RISP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025691552.1 | 1e-145 | zinc finger protein 4 | ||||
Refseq | XP_025691553.1 | 1e-145 | zinc finger protein 4 | ||||
Refseq | XP_025691554.1 | 1e-145 | zinc finger protein 4 | ||||
TrEMBL | A0A444ZSS5 | 1e-144 | A0A444ZSS5_ARAHY; Uncharacterized protein | ||||
STRING | XP_007158792.1 | 1e-113 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66140.1 | 3e-32 | zinc finger protein 4 |