PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy007907
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 329aa    MW: 36130.3 Da    PI: 7.4237
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59542289PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-13113164155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Ahy007907 113 QRMTHIAVERNRRKQMNDYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 164
                79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.18E-14111168No hitNo description
PROSITE profilePS5088815.421112163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-13112168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.11E-17112179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-10113164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-10118169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MALEAVVFPQ DPLFSSYASS TTTTKDYFYS SFLGSHHHDL IGIINNNIIQ QNQATNNSDS  60
SSPPSNNDHY ATSSSSPDCC AATVDQPSVP TTTGRRKRRR TKTTKNKEDI ENQRMTHIAV  120
ERNRRKQMND YLAVLRSLMP PSYVQRGDQA SIIGGAINFV KELEQLLQSM EGQKKPNHHD  180
TTAAGGAAGM NSSGQSSPFG EFFAFPQYTT RGHHQGNNNA TTMAAEQQQK QWAAAVADIE  240
VTMVDSHANL KILSKKRHGQ LMKMVVGLQS LSLTILHLNV TTLHDFVLYS VSVKAEDGCQ  300
LNTVDEIAAA VNQLLCAVQQ EASSFNQIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19599RKRRR
295100RKRRRT
3113124RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025667573.10.0transcription factor bHLH96
RefseqXP_025667574.10.0transcription factor bHLH96
SwissprotQ9C7T44e-90BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A445C9C80.0A0A445C9C8_ARAHY; Uncharacterized protein
STRINGGLYMA14G35560.11e-117(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.19e-82bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]