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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ahy007688 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 277aa MW: 31858.5 Da PI: 8.6062 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 13.1 | 0.00028 | 111 | 134 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+kC++C+ksF++ L +H + H
Ahy007688 111 WKCGYCKKSFRDEKFLDQHFDNrH 134
58**************99976655 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50157 | 9.058 | 111 | 139 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 113 | 134 | IPR007087 | Zinc finger, C2H2 |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0046872 | Molecular Function | metal ion binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 277 aa Download sequence Send to blast |
MNKAIDFASV FLLFTLFSHQ FILRVSSSNS PILPNQGYAD ERILKPEQEH VHEVHCSRER 60 SRAARKVIEE YLTPFLEQEN YQLSSKCRLH PENDMFRDQE EHKICLGFHD WKCGYCKKSF 120 RDEKFLDQHF DNRHSNHLNL SDGKCLADLC GALHCDAVMN TKFSRSKCNP AAATRNKHLC 180 ESLAESCFPV SDGPSASRLH EIFLHQFCEA HTCSGKQKPF SRGGKVQKSI FVVVSGALIL 240 VLLPLFYLFL YLVQRDMKSS TQELRRISKM GRKSKPS |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_016187605.1 | 0.0 | uncharacterized protein LOC107629345 | ||||
| Refseq | XP_020973371.1 | 0.0 | uncharacterized protein LOC107629345 | ||||
| Refseq | XP_025641544.1 | 0.0 | uncharacterized protein LOC112736352 | ||||
| TrEMBL | A0A445AAG2 | 0.0 | A0A445AAG2_ARAHY; Uncharacterized protein | ||||
| STRING | XP_004515836.1 | 1e-144 | (Cicer arietinum) | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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